Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0656 ATGGATGGGAGAGAAGCTATGGCATTCTCTGGAGGTCCTCCCTCATATTACATGCATAGAGGAGGCATTGTTGGGTCTGTCTCTGGAACACATTCCGGAGGGTTTCAAGTGCCTCCTGGGTTCAGAACAAACGCCGGCATACCAGCACAGTCAAATGTACGGGGTAGCTCTATGGGTTCTACAGTTACAGTAGAACCTGCTCATACCAATCATAGTCATAGTCATGGTATTAGCATTAGTTCGTCTCCTGGAGTACCTCCTTCAAGCGATCGTGTGAAAAAGAAACGAGGAAGACCCCGTAAATACCGTCCTGATGGACCCGTTTCTCTGGGTCTGTCTCCCATGTCTGCCACTGCAAATTCTACCCCTGCCTCTAGCACTCCATCCCAGAAACGAGCTAGGGGACGCCCACCTGGAAGTGGAAGAAAACAACAACTAGCCTCGCTAGGTGAATGGATGAACAGTTCTGCAGGGATGGCTTTTGCTCCTCATGTTATCACAATTGGAGCTGGGGAGGACATTGTAGCAAAGTTACTGTCCATTTCGCAGCAGAGATCTAGGGCGCTGTGCATCTTGTCAGGAACCGGGTCAGTTTCATCAGTTACTCTGCGGCAGCCTGCTTCTACTGTTGTCAGCATCACTCTTGAGGGCCGATTCCAAATATTACACTTGTCTGGTTCTTACCTGGTTGCTGAAGATGGTGGACACCGCGATAGAACAGGTGGCATGAGTGTTTCCCTTGCTAGTCCTGATGGTCATGTTATTGGTGGTGGGGTTACTGTGCTTATTGCTGCAAGCCAAGTGCAGGTGGTGGTGTGCAGTTTTATATATGAAGGGTCCAAGGCCAAGACTAAGCAAGAGAGTGCCCCTCAGGGCGATGTTTCTGAAGCCGAGCATGATAACAAGTTAGCTACTCCGGCGAGTGCTCCATGGTCTCAAAACTACAGTCAACCAACAAGAGGCATTTGGCCATCCGATCTGAAAAGTACACATACTGGTATTGACTTGATGCATGGATAA 1020 0.4922 MDGREAMAFSGGPPSYYMHRGGIVGSVSGTHSGGFQVPPGFRTNAGIPAQSNVRGSSMGSTVTVEPAHTNHSHSHGISISSSPGVPPSSDRVKKKRGRPRKYRPDGPVSLGLSPMSATANSTPASSTPSQKRARGRPPGSGRKQQLASLGEWMNSSAGMAFAPHVITIGAGEDIVAKLLSISQQRSRALCILSGTGSVSSVTLRQPASTVVSITLEGRFQILHLSGSYLVAEDGGHRDRTGGMSVSLASPDGHVIGGGVTVLIAASQVQVVVCSFIYEGSKAKTKQESAPQGDVSEAEHDNKLATPASAPWSQNYSQPTRGIWPSDLKSTHTGIDLMHG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0656 339 Gene3D - 163 295 - -
Lele52g0656 339 MobiDBLite consensus disorder prediction 113 133 - -
Lele52g0656 339 MobiDBLite consensus disorder prediction 306 326 - -
Lele52g0656 339 CDD DUF296 163 275 IPR005175 -
Lele52g0656 339 ProSiteProfiles PPC domain profile profile. 156 300 IPR005175 -
Lele52g0656 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 69 306 IPR039605 GO:0003680
Lele52g0656 339 Pfam Plants and Prokaryotes Conserved (PCC) domain 163 275 IPR005175 -
Lele52g0656 339 MobiDBLite consensus disorder prediction 45 87 - -
Lele52g0656 339 MobiDBLite consensus disorder prediction 284 327 - -
Lele52g0656 339 MobiDBLite consensus disorder prediction 29 146 - -
Lele52g0656 339 SUPERFAMILY AF0104/ALDC/Ptd012-like 160 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0656 Lele-ChrLele52 4145850 4148569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0656 1 324 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 49.030 4.26e-94 283