Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0623 ATGAATGGTATTTGTGGTTGCCTTATTAGTTACGTGTTCAAAGGGAAGGCTATTGGTTTTCATCGTAGCAAAATATTGAATGTTCAAAAATTTAAACCGTTTCTGGATGTTGTTGCTTCTAGTAATCGTTCTCCAGTTGTTGAAACTATTACAGTTTTCATTAGTGGTTGTAATGTAAAACAGGATTTGTCATCAAATTCAGCTAATTTCAAACTGAGCAATTCAATTTCCAGGTTCCTTCCCTTCTATCTCTGTGATTTCTTTATTCGTTGCCGGTTTTCTCCATTTTCTTCCCGGTTTCTTCAAATGACGTCGTCTCAGGAGCATGAGATGGATCAAGACGACGATGGCGGAACCTCCGACCTCAGCACCAGCGCCGGCGATCCTGTGGCCATCAACACCGAAAAAAACAGTGGACTTTCGAAAGAGCCTGACTCGGACGGTCCCATGGCTTTCCAGGTCTTGCCGTTGAAGGAGGAGCCCGTTGATTCGGACGCGCCGTCAGACCAGGAACAAAAGACGCCGCCTTCTTCGTCGGCTCCGATTGGAGACTTTCCTGTCGCGATGCAGATGCAAATGCCCCTAACTATACCCACGCCCATGCCGGTCGCCACCGCGAGACGCTCCTCCACCAAGGACCGCCACACGAAGGTGGAAGGCCGCGGACGAAGGATCCGAATACCCGCCACTTGCGCGGCTCGGATCTTTCAGCTGACTCGGGAGTTAGGTCATAAGTCTGATGGCGAAACCGTGCGGTGGCTCCTCGAACACGCGGAGCAGGCCATCATCGAGGCCACCGGCACAGGCACCGTCCCAGCCATCGCTGTCTCCGTCGGGGGAGCTCTGAAGATTCCTACAACGTCTAGCGCCAACAGCAATCAGGACTCCGAACTCAGGAAGAAGCGGAACAGGCCGTCGAATAGTGAGTTTCTTGACGTGAGTGAAGCCGTTTCACAATCGTCCGGTTTGGCCCCGGCTCAATCGGCTCTTCCGCAAGGCCTCGTGCCTGTGTGGGCAGTGGGCAACACGAATATGATGATCCCAGCAAACGCCTTTTGGATGATCCCTCCGGCGGGGGCGGCGGGGGCTCCCGTGGGTGGAAGTCCGGGATCGTCAAACCAACAACCTCGAATATGGACTCTGTCGCCGACGGTGACGCCCGTATTCAACGTGTCAGCCAGACCCGTATCGTCTTTGGTGGCAGCAACAACAAATACCACGGGCGGCATAGAAGTCCAGTCGGTGGGATGCAACAATTCGTCCAACACAGCAGCGGTGAGCACGAGCACGGTGGGGCCAACGGCGGCAAAGAAATCGACGATGGCCCCGAGCGTTAGTGGAAGCGGGGCGACGGGAAGTAGTAGTAGCAGCGGCAGCAAGGCGCAGATGTTGAGGGACTTTTCATTGGAGATTTACGATAAGCGAGAGTTGCCGCTGATGGGGCGGTCAGGGAACAATAAACAAGCGTAA 1470 0.5388 MNGICGCLISYVFKGKAIGFHRSKILNVQKFKPFLDVVASSNRSPVVETITVFISGCNVKQDLSSNSANFKLSNSISRFLPFYLCDFFIRCRFSPFSSRFLQMTSSQEHEMDQDDDGGTSDLSTSAGDPVAINTEKNSGLSKEPDSDGPMAFQVLPLKEEPVDSDAPSDQEQKTPPSSSAPIGDFPVAMQMQMPLTIPTPMPVATARRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGALKIPTTSSANSNQDSELRKKRNRPSNSEFLDVSEAVSQSSGLAPAQSALPQGLVPVWAVGNTNMMIPANAFWMIPPAGAAGAPVGGSPGSSNQQPRIWTLSPTVTPVFNVSARPVSSLVAATTNTTGGIEVQSVGCNNSSNTAAVSTSTVGPTAAKKSTMAPSVSGSGATGSSSSSGSKAQMLRDFSLEIYDKRELPLMGRSGNNKQA 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0623 489 Pfam TCP family transcription factor 210 298 IPR017887 -
Lele52g0623 489 ProSiteProfiles TCP domain profile. 211 265 IPR017887 -
Lele52g0623 489 MobiDBLite consensus disorder prediction 201 220 - -
Lele52g0623 489 MobiDBLite consensus disorder prediction 105 184 - -
Lele52g0623 489 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 166 476 IPR005333 GO:0003700
Lele52g0623 489 MobiDBLite consensus disorder prediction 286 308 - -
Lele52g0623 489 MobiDBLite consensus disorder prediction 118 139 - -
Lele52g0623 489 MobiDBLite consensus disorder prediction 421 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0623 Lele-ChrLele52 3919666 3922955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0623 207 477 TCP Transcription Factor Family AT2G45680 48.000 1.61e-68 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele52g0623 TCP 2.6e-28 No_clan