Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0605 ATGTTATCATCGAGCATGAGAAGGCATCGTCAATTTCATCTCCAGCATGCTCTCTTGTGCTCTGTTCTCTGTCTTCTTTCATCTATCACGGTGTCGCCGGTGACTGAGAAGGAGATTTTGCTTCAATTTAAGGGTAACATTATAGATGATCCTCAAAACAGCTTGAGCTCATGGGTTTCGAGTGGAAACCCTTGTGAATATTATAGGGGAGTCTTCTGTAACTCCGAAGGTTTTGTGGAAAGAATCGTGCTATGGAACACTAGTTTGGGCGGAGTATTGGCGCCGGCTCTGTCGGGGTTGAAGAGTTTGAGGATTTTGACACTGTTCGGGAATCGATTTTCGGGGAAGATTCCGGAAGAATATGGTGACATTCACTCATTGTGGAAGATCAATTTGAGCTCCAATGCATTATCTGGTTCAATCCCAGAGTTCATTGGTGACTTAGAAAGTATCCGCTTTCTGGATTTATCCAAGAATGGCTTCACTGGGGAGATTCCTTCGGCTTTGTTTAGGCACTGTTACAAAACCAGGTTCATTTCTCTTTCTCATAACAATCTTTCAGGTATAATTCCGGCGTCATTGGCGAATTGCTCGAACCTCGAAGGTTTTGATTTTTCTTTCAACAATTTAAGAGGGGGTATTCCTTCTGGACTTTGTGACATTCCTAGATTATCCTACATGTCCTTGAGAAGCAATGCCTTATCAGGAACATTTAAACAGCAGATTGTGGGATGCCAGAGTTTGACACTTTTGGATCTCGGAGATAATACATTCACTGGTTCAGCCCCTTTTAGCATCATCGAAACCAAGAATCTCACTTATTTCAATGTATCACATAACGGTTTTAGTGGGCAAATTCCTGAGATCACCGCCTGTAGTGAGAGATTACAATTTTTTGATGCTTCAGGGAATGCTTTGGGTGGAGAGATTCCTTCTAGTATAACAGCATGCAAGAACCTCAAGCTATTGGCCTTGGAGTCTAATAGGTTGAAAGGGACAATCCCATTAGGGATTAAGGATATGGGAAGTCTACTAGTTATTAAATTAGGTAATAATTCAGTGAGTGGATCGATTCCCAAGGGATTTGGCAACATTCAGCTGCTTGAAGTCCTTGATTTGCATAATCTAAACCTCGTCGGTGAAATTCCCAAAGATATAAGCAATTGTAGATTCCTTCTAGAGCTGAATGTTTCTGGTAATGACTTAGAAGGAGAGATTCCTCAGAACCTTAACAACTTAACATATCTGAAAGTTCTTGACCTGCATCAAAATCAGCTCAATGGCAGCATCCCAACAGGCGTAGGAAACTTCTCAAAGATCCAATACATGGATTTGTCACACAATTCACTTTCTGGTTCTATCCCCTTTTCACTTGGGAATTTGAACAAACTGACATTTTTTAATCTCTCATTTAACAATCTCTCTGGTGTCATTCCAACTATTGCATCGATACAGAGTTTCGGTTCTTCAGCATTTTCCAACAATCCTTATCTTTGTGGTGTTCCTTTGGACACCCCTTGCTCAGCCATTGGCACTACCACACAACCTACTTCTAGGAAGACTAAATTAAGTGTCTCTGCAATTATTGCAATTGTTGCTGCAGCAGTGATTCTTATTGGGGTTTGTTTGGTGAGCATCATGAATATCAAGGCCCGTAGCAAGAAAAAAGATGAACAGATGATGATTGTTGAGAGTACACCCCTTGGATCCACAGAATCAAATGTTATAATAGGAAAGCTGGTTCTCTTCAGCAAAAGTTTACCATCCAAGTATGAAGACTGGGAGGCAGGTACGAAAGCTTTGCTTGATAAAGAGTCTATGATCGGGCACGGATCGATTGGGACGGTCTACAGAACTGATTTTGAAGGTGGGATCTCAATTGCAGTGAAAAAGCTTGAGACTTTGGGAAGAATCCGAAACCAGGATGAATTCGAGCATGAAATCGGGCGAATAAGTAACCTTCGATACCCTAATTTAGTTGCCTTTCAAGGTTACTATTGGTCCTCGACAATGCAGTTGATTCTCTCAGAGTTTGTCTCAAATGGGAATCTCTACGATAATCTACACGGCTTCGGCTATCCCGGAACTAGCACTAGCCGTGGCAACCGGGAAATAAACTGGTCTAGAAGGTACCAAATTGCAGTTGGAACTGCAAGAGCCCTTGCCTACCTTCACCATGACTGTCAACCTCCAATTCTTCATCTCAACATAAAGTCCTCAAACATACTCTTAGATGACAAGTATGAGGCAAAGTTGTGTGATTATGGGTTGGGGAAGTTACTTCCCATTTTGGACAATTACGGTTTGACCAAATTCCATAATTCCGTTGGGTATGTTGCACCAGAATTGGCTCAGAGTATGAGACAGAGTGAGAAATGTGACGTGTATAGTTTTGGGGTTATTCTTTTGGAGTTGGTCACAGGGAGGAAGCCTGTAGAAAGTCCGACAGCGAGCGAGGTTGTGGTTTTGTGTGAATATGTAAGAGGACTATTGGAGACTGGTTCTGCTTCACTATGCTTTGATACGAGGTTGCTGGGTTTTGCGGAGAACGAGTTAATTCAGGTGATGAGATTGGGTCTTATTTGTACGTCGGAGGATCCTTCAAGGAGACCAAGCATGGCTGAGGTTGTGCAGGTTCTTGAATCTATCAGAAATGGATTGGAATCAAATTAA 2673 0.4205 MLSSSMRRHRQFHLQHALLCSVLCLLSSITVSPVTEKEILLQFKGNIIDDPQNSLSSWVSSGNPCEYYRGVFCNSEGFVERIVLWNTSLGGVLAPALSGLKSLRILTLFGNRFSGKIPEEYGDIHSLWKINLSSNALSGSIPEFIGDLESIRFLDLSKNGFTGEIPSALFRHCYKTRFISLSHNNLSGIIPASLANCSNLEGFDFSFNNLRGGIPSGLCDIPRLSYMSLRSNALSGTFKQQIVGCQSLTLLDLGDNTFTGSAPFSIIETKNLTYFNVSHNGFSGQIPEITACSERLQFFDASGNALGGEIPSSITACKNLKLLALESNRLKGTIPLGIKDMGSLLVIKLGNNSVSGSIPKGFGNIQLLEVLDLHNLNLVGEIPKDISNCRFLLELNVSGNDLEGEIPQNLNNLTYLKVLDLHQNQLNGSIPTGVGNFSKIQYMDLSHNSLSGSIPFSLGNLNKLTFFNLSFNNLSGVIPTIASIQSFGSSAFSNNPYLCGVPLDTPCSAIGTTTQPTSRKTKLSVSAIIAIVAAAVILIGVCLVSIMNIKARSKKKDEQMMIVESTPLGSTESNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKESMIGHGSIGTVYRTDFEGGISIAVKKLETLGRIRNQDEFEHEIGRISNLRYPNLVAFQGYYWSSTMQLILSEFVSNGNLYDNLHGFGYPGTSTSRGNREINWSRRYQIAVGTARALAYLHHDCQPPILHLNIKSSNILLDDKYEAKLCDYGLGKLLPILDNYGLTKFHNSVGYVAPELAQSMRQSEKCDVYSFGVILLELVTGRKPVESPTASEVVVLCEYVRGLLETGSASLCFDTRLLGFAENELIQVMRLGLICTSEDPSRRPSMAEVVQVLESIRNGLESN 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0605 890 FunFam Putative LRR receptor-like serine/threonine-protein kinase 579 678 - -
Lele52g0605 890 FunFam Putative LRR receptor-like serine/threonine-protein kinase 680 887 - -
Lele52g0605 890 PANTHER OS05G0588300 PROTEIN 218 336 - -
Lele52g0605 890 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 172 510 - -
Lele52g0605 890 Gene3D Ribonuclease Inhibitor 240 510 IPR032675 -
Lele52g0605 890 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 33 171 - -
Lele52g0605 890 ProSiteProfiles Protein kinase domain profile. 602 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0605 890 Pfam Protein kinase domain 604 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0605 890 Gene3D Ribonuclease Inhibitor 34 170 IPR032675 -
Lele52g0605 890 Gene3D Ribonuclease Inhibitor 171 239 IPR032675 -
Lele52g0605 890 SUPERFAMILY Protein kinase-like (PK-like) 603 881 IPR011009 -
Lele52g0605 890 SUPERFAMILY L domain-like 171 499 - -
Lele52g0605 890 Gene3D Phosphorylase Kinase; domain 1 583 679 - -
Lele52g0605 890 SUPERFAMILY L domain-like 73 216 - -
Lele52g0605 890 CDD STKc_IRAK 608 883 - -
Lele52g0605 890 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Lele52g0605 890 Gene3D Transferase(Phosphotransferase) domain 1 680 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0605 Lele-ChrLele52 3784919 3787674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0605 28 889 Receptor kinase-like Gene Family AT1G62950 64.834 0.0 1107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lele52g0605 Pkinase 5.3e-35 CL0016