Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0601 ATGACAAAAGGGGTGACGATGCAAAAACAGGGGGTGCCGTGGAAAACCCAAACGATTTTACTGGCAACATCAAACGCCAAAACTAGGGACTTTGTCGCTGCCCCTCCCACCCTCCTCCATTTTAAAACACCCCCTTCATCCCTCCCCTCCCCTTTGCCTCTTCTCACTGCTACAAATTTCATCGCATTTCTTCTTCATACTATTCTCAAGGCAGATATCTGTTGGAACCCTAGAGAAGAAGAATTACCTATTTCCGTAGATTCACCTTCTCTTTTCCCTTCATCGCAGAGAATCATGGGTTCTCAACAGAACGACAGCACAAGCTACCCGCCTTCAGAGCCGAAGCCATGCGCCAACAACTGTGGATTCTTTGGCACCGCCGGCACCATGAACCTCTGTTCTAAATGTTACCGAGACTTCCAAATCAAAGAGCAGCAAGCTGCTTCCGCTAAAGCGGCCATGGAGAAATCACTCAACCCTACATCCGCTTCTTCACCTAATCAGACGCTGGGATCGGATCCTTCAGCTCAATTCCTCCTCAGAACTCCTTTTGAAGCTTCGTCTTCATCGTCGGCGGCTCTCGGTGGCGATCAAGGGCAGCCAAAGGCGGCGAACCGGTGTAGCTGTTGTAACAAGAAGGTTGGGTTGACTGGATTCACGTGCAAGTGTGGGAGCACTTTCTGCGGGGCACATCGTTATCCGGAGAAGCACGAGTGTACATATGACTTCAAGGTTTCCGGCCGTGACGCGATTGCAAAGGCTAATCCGGTGGTAAAAGCCCCTAAACTAGACACGATTTAG 801 0.5019 MTKGVTMQKQGVPWKTQTILLATSNAKTRDFVAAPPTLLHFKTPPSSLPSPLPLLTATNFIAFLLHTILKADICWNPREEELPISVDSPSLFPSSQRIMGSQQNDSTSYPPSEPKPCANNCGFFGTAGTMNLCSKCYRDFQIKEQQAASAKAAMEKSLNPTSASSPNQTLGSDPSAQFLLRTPFEASSSSSAALGGDQGQPKAANRCSCCNKKVGLTGFTCKCGSTFCGAHRYPEKHECTYDFKVSGRDAIAKANPVVKAPKLDTI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0601 266 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 117 163 - -
Lele52g0601 266 ProSiteProfiles Zinc finger A20-type profile. 111 145 IPR002653 GO:0003677|GO:0008270
Lele52g0601 266 MobiDBLite consensus disorder prediction 155 175 - -
Lele52g0601 266 MobiDBLite consensus disorder prediction 88 112 - -
Lele52g0601 266 Pfam A20-like zinc finger 116 138 IPR002653 GO:0003677|GO:0008270
Lele52g0601 266 Gene3D - 185 262 IPR035896 -
Lele52g0601 266 SMART AN1_Zf_4 207 244 IPR000058 GO:0008270
Lele52g0601 266 FunFam Zinc finger AN1-type containing 6 184 262 - -
Lele52g0601 266 MobiDBLite consensus disorder prediction 86 112 - -
Lele52g0601 266 Gene3D - 99 165 - -
Lele52g0601 266 MobiDBLite consensus disorder prediction 151 175 - -
Lele52g0601 266 SUPERFAMILY AN1-like Zinc finger 199 261 IPR035896 -
Lele52g0601 266 Pfam AN1-like Zinc finger 207 243 IPR000058 GO:0008270
Lele52g0601 266 PANTHER AN1-TYPE ZINC FINGER PROTEIN 114 266 - -
Lele52g0601 266 ProSiteProfiles Zinc finger AN1-type profile. 201 247 IPR000058 GO:0008270
Lele52g0601 266 SMART A20_3 114 138 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0601 Lele-ChrLele52 3769022 3770672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0601 111 266 C2H2 Transcription Factor Family AT3G52800 45.963 2.88e-37 128