Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0600 ATGGCAGGGCATGGGCACTCTCTTCCTCCGCCATTCCATATGCACCAGCAAACCCAGCATGAGCATCAATTTCAGTCTCTGCACCAAAACGCAGAAGAAGAACAAAGCGGAAGTAGCAGTGGCCTGAACCTCGCCCACAAGAGAGAACGGGAAGAAACCAGCCACAATAACAATACCGATCAAGGCAACATGAATGGGGAAGGGGGAGAAATCTCGAGAAGGCCTCGAGGAAGACCCTCCGGATCCAAGAACAAACCCAAACCACCCATCATCATAACCCGAGACAGTGCCAATGCCCTTAGAACCCACGTCATGGAGGTAGCCGACGGTTCTGACATCGTCGAGAGCGTCTCCAGCTTCGCCAGGCGACGCCAGAGTGGGGTTTGTATTATGAGCGGCACCGGCACCGTCACCAATGTCACTTTGAGGCAACCCGCTTCTTCCGGTGCTGTCGTCACTCTTCACGGAAGGTTCGAGATCTTGTCGCTCGCTGGCTCCTTCTTGCCGCCACCGGCTCCACCGGCAGCATCCGGTTTGACCATATATTTGGCTGGCGGACAAGGTCAGGTGGTCGGGGGAACCGTGGTGGGCACGCTCATGGCTGCAGGACCGGTGGTGATCATGGCAGCGTCGTTTAGCAACGCTGCGTACGAGAGGCTTCCTTTGGAGGAAGAAGACCCATCGGCGGCGATTCAAGGGACCGGAATTGGGTCACCGGGCGCAGTTGGTCAGCAACAGCAACAGTTATTAGGGGACGCATCAGGTCCACTCATGCATGCTTTGCCTCCTAATCTTCTGAATTCTATGCAGATGGCGTCTGATCAGCCTTTCTGGGCTAATGCTCGTCCTCCATTCGGATGA 861 0.5575 MAGHGHSLPPPFHMHQQTQHEHQFQSLHQNAEEEQSGSSSGLNLAHKREREETSHNNNTDQGNMNGEGGEISRRPRGRPSGSKNKPKPPIIITRDSANALRTHVMEVADGSDIVESVSSFARRRQSGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGTVVGTLMAAGPVVIMAASFSNAAYERLPLEEEDPSAAIQGTGIGSPGAVGQQQQQLLGDASGPLMHALPPNLLNSMQMASDQPFWANARPPFG 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0600 286 MobiDBLite consensus disorder prediction 12 43 - -
Lele52g0600 286 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 226 - -
Lele52g0600 286 MobiDBLite consensus disorder prediction 1 92 - -
Lele52g0600 286 ProSiteProfiles PPC domain profile profile. 97 234 IPR005175 -
Lele52g0600 286 CDD DUF296 101 168 IPR005175 -
Lele52g0600 286 PIRSF ESCAROLA 13 285 IPR014476 GO:0003680
Lele52g0600 286 Pfam Plants and Prokaryotes Conserved (PCC) domain 101 214 IPR005175 -
Lele52g0600 286 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 32 279 IPR014476 GO:0003680
Lele52g0600 286 FunFam AT-hook motif nuclear-localized protein 100 227 - -
Lele52g0600 286 Gene3D - 100 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0600 Lele-ChrLele52 3763758 3764618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0600 7 285 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 55.346 5.94e-83 251