Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0583 ATGCCAGAAGCAATTCAGTTCTATGATGAAAATTTCAGACTTGCACGGTATATATTTGACATGTATCAGTACAGATGGTCCAAGATTGCTGCCAGATTACCTGGAAGGACAGACAATGAGATTAAGAATCACTGGAACACCCACATCAAGAAAAAGCTGCTTAAGATGGGCATTGATCCTGTTACTCATGAACCTATTAATAAACAGGTTGCCTCCCAGGAAACATCTTCCCATCAGAATAATAATCCACAATCTGCAGATAATAATCATCAGCTTAAGGAAAGTGAGAGGGTTCCCAACTCCGAGGAGAATTCGAGCACATCCCCAGTTGAAAACTCTTCTTCTGGGGACGAGTCCCTTCTGCTAGACAGTATTTGCAGCGACGACTCTCTAATGAACAGCTTGTGGCTTGATGAAGCGCTGGTAGATACGTTATCGGACAGTGAACCAAAAGTTCAGAATATTACTAATAATAATGGCATGGCCATGCCATCTTGGGAGGACAACTGTGCTTGGTTTTTGGACTGTCAAGACTTTGGTTTTCATGATTTTGGTTTTAGTTGTTTTAATGAGAATGAATCAAATGCACTGCAAACTTTAGGAATCGAGGAAAAGGATATCATTAGCAAGCACTACTCCCAATGA 645 0.4093 MPEAIQFYDENFRLARYIFDMYQYRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHEPINKQVASQETSSHQNNNPQSADNNHQLKESERVPNSEENSSTSPVENSSSGDESLLLDSICSDDSLMNSLWLDEALVDTLSDSEPKVQNITNNNGMAMPSWEDNCAWFLDCQDFGFHDFGFSCFNENESNALQTLGIEEKDIISKHYSQ 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0583 214 MobiDBLite consensus disorder prediction 69 119 - -
Lele52g0583 214 PANTHER F14D16.11-RELATED 24 120 - -
Lele52g0583 214 CDD SANT 9 49 IPR001005 -
Lele52g0583 214 ProSiteProfiles Myb-like domain profile. 9 49 IPR001005 -
Lele52g0583 214 SMART sant 3 51 IPR001005 -
Lele52g0583 214 Gene3D - 8 99 - -
Lele52g0583 214 Pfam Myb-like DNA-binding domain 22 48 IPR001005 -
Lele52g0583 214 MobiDBLite consensus disorder prediction 69 89 - -
Lele52g0583 214 SUPERFAMILY Homeodomain-like 9 58 IPR009057 -
Lele52g0583 214 MobiDBLite consensus disorder prediction 101 119 - -
Lele52g0583 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 53 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0583 Lele-ChrLele52 3640976 3641947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0583 25 186 MYB Transcription Factor Family AT4G22680 45.810 1.60e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele52g0583 Myb_DNA-binding 9.6e-08 CL0123