Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0574 ATGGACTTGAAATCGTCTCATGTGTCTCCTGTTCTAACCGACCCTGTTCCTGTTAACAAGTCGAGACTAGGAATCCATTCTAGCGTATTAAGTTACTCCCAGCAGGATCCTTCCCCTACAGCTCCGGGTAAGTATACAAGAACCGGTTCGAGAAAAAGTGTTGGAAATCTTGATGATGTTCGCTCCAATGGATGGCTAGACGCCATGAAGGCTTCATCGCCGCCGAGGAAGAAGCTGGTTAAGGCTTCTAATAACACTCAGGTGACTTATTTTGACTCTGACAATGACGACTATAACTCCTGGAAGCGTGATTATCCATCCGCACTGGACGCTTTTGACAACCTTGTTGAGCGTGCAAAGGATAAGAAGATTGCAGTGTTTCTTGATTATGATGGAACTCTTTCCCCAATAGTGGACGATCCAGATTCTGCGTTTATGTCCGAAGCTGTTATTGTGTTCATTTCTGATTTCTCTGCTCTTTCCTTTTGGTTGCTTGGTCGATGTCAAAACATGGCTCAGATGCGGGCAAAGGTGAGGAGTGTGGCAAAGTGCTTTCCCACGGCAATCGTTAGCGGAAGAAGCCGTGATCAGGTTTTTGATTTAGTAAAATTAACGGAGCTCTACTATGCTGGGAGTCATGGGATGGACATCATTGGCCATGCCTGTGAAGCTCTGTTCAATAACCATCCAAATTGTGTGAAATCTACTGACCATCAGGGAAATGAAGTAACTCTGTTTCAACCCGCAAAAGAATTCCTGCCTATGATCGACGAGGTTTTTAGAACCCTGGTCGAGATAACTAGAGATATCGAAGGCGCAAAGGTTGAAAATCACAAGTTTTGCGCCTCTGTACATTATCGCAATGTAGATGAGAATAATTGGACAACTGTTGGACAACTTGTCCATGACATGTTAAAAAACTACCCACGTTTACGTTCAACTCACGGACGCAAGGTTTTAGAGGTGCGTCCTGTGATTGACTGGGACAAAGGAAAGGCAGTAGAGTTTTTAATGGAGTCTCTGGGGTTAAGTGACAGGGACGATGTGATCGCCATCTACATTGGGGACGATAAGACGGACGAAGATGCGTTTAAGGTATTGCGGGAGAACAAGAGGGGATATGGCATTGTGGTGTCGTCGGTGAGGAAAGAGAGCAACGCGTTTTACTCGCTGAGGGACACGTCGGAGGTGATGAAGTTTCTGCAGCTTCTGGTGAATTGGAAGAGGCAACAAGACGACGACCGGAAGCAATCCCTATCTCTTGGCTTCTGGTTTTGA 1278 0.4577 MDLKSSHVSPVLTDPVPVNKSRLGIHSSVLSYSQQDPSPTAPGKYTRTGSRKSVGNLDDVRSNGWLDAMKASSPPRKKLVKASNNTQVTYFDSDNDDYNSWKRDYPSALDAFDNLVERAKDKKIAVFLDYDGTLSPIVDDPDSAFMSEAVIVFISDFSALSFWLLGRCQNMAQMRAKVRSVAKCFPTAIVSGRSRDQVFDLVKLTELYYAGSHGMDIIGHACEALFNNHPNCVKSTDHQGNEVTLFQPAKEFLPMIDEVFRTLVEITRDIEGAKVENHKFCASVHYRNVDENNWTTVGQLVHDMLKNYPRLRSTHGRKVLEVRPVIDWDKGKAVEFLMESLGLSDRDDVIAIYIGDDKTDEDAFKVLRENKRGYGIVVSSVRKESNAFYSLRDTSEVMKFLQLLVNWKRQQDDDRKQSLSLGFWF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0574 425 FunFam Trehalose 6-phosphate phosphatase 255 414 - -
Lele52g0574 425 Gene3D - 124 234 IPR023214 -
Lele52g0574 425 Gene3D - 248 419 IPR023214 -
Lele52g0574 425 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 126 368 IPR006379 -
Lele52g0574 425 MobiDBLite consensus disorder prediction 32 53 - -
Lele52g0574 425 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 44 414 IPR044651 GO:0004805|GO:0005992
Lele52g0574 425 TIGRFAM T6PP: trehalose-phosphatase 174 405 IPR003337 GO:0003824|GO:0005992
Lele52g0574 425 SUPERFAMILY HAD-like 125 409 IPR036412 -
Lele52g0574 425 FunFam Trehalose 6-phosphate phosphatase 249 325 - -
Lele52g0574 425 Pfam Trehalose-phosphatase 172 395 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0574 Lele-ChrLele52 3574411 3576382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0574 120 404 Trehalose Biosynthesis Gene Families AT1G70290 25.000 1.22e-08 55.5