Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0559 ATGCAGTTGGAACAAAAAGAACAGGGAAACAGGGGAATTGACAGCTTAAACGGTTATCATAGTGATGCTAACCCAATAGAAGCTTTCGGAGGCAACCATCAGGAATCTCTGGTGAAGTGGATAAATAGTGTGCTTCCTCACTTAAATCTACCCCTAGAAACTTCAGAGGAGGAACTAAGGGCATGGCTGAGGGATGGATCTGTATTATGCAGCATTTTGGACAGGCTGATTCCTGGTTCAGTGGGAGTAGGAAGTTATTCTTTGGATGAGCAAGTAAACATTAGAAGGTTTCTACAGGCTATGGATGAGCTGGGATTGCCTGGATTTGATTTGTCAAGGCTAGAGCAGGGATCGGTAGGGCCTGTGTTGCAGTGCCTTGAGGCTCTGAAAACTCATTTTGCTTCAAATGTTGAGAGAGAAAATATCCAAAGTCTTTCCAGAAAGAGGTGGGATCAATCAGATCTAGCATACGGGGCCTATGGAAGTGAAGAGAGGCAAAAATTTTCAGGGGATTCAAATTTTGAACATGAAATTGATGGCTCTGTCCTATCAGATGAAGCTACTCTCACACATCATGTTGGATCCAAGTCTAAAGAACTCTTACAGTTGAAACGCGGATTGCATGTGGATCTTTCTGATGATAAAATTATGGAGTTATTCAAATCAAACAGTTTAGATGTAAGCCAAAAGCTACTTGTCCATGTCTATGTCCCCTCTAATGCTTCGACTCAATCACTTTTTAACATAGGAAATAGGATTATGGATGATATCTTTGGAAGAAAGAATGGAGATGTGCCTCAATCTCAGTATGCAGCATTCCTGTTGAGAAAAATTCTTCATGTGATAGAGTGGCGCTTTTCTAATCAAGCAGAAAGCCTGAAAAATCAAAACAATATATTAAAGGTTCGTGAAGGGAAGTACCAATTGAAAATAAATGCACTTGAAACCCTGGCAGCAGGGACAAATGAAGAGAATGAGGTTGTCAAAAGTTGGTTACAGCAGTTGAAGTTTGCTCTTCAAGTTGAGAAAACTAAAATTGAGGAGAAAAACAAACTTGATGAGCAGGATGTTGCTCGTTTAAAACAAGAAAAAGTTCGTGGTGAAATTGAGATTTCTGCATGGAAGCAAGAATTGGAAATGGTCAAAAAAGCACATGAAGAGCTCCGTGTGCAGTCAGAATTACGTGCGGAAGAATGCAAATCTGAATACGAGAAGAGGATAAGGGAACTAGAATGTGGTCTTGCTGATGCAAGGAACCAAGCCAAGAAACTGGAGGCACTTATAGAATCTAAATCTCTTAAATGGAAGAACAGAGAGAATACCTATCAAAGTTTCATTAATTACCAATTCGGAGCATTCAAGGAATTGAGAGCTGCGATGGAATCTGTAAAAGATGATGCGCTAAAAACAAAAAGAAGCTACTTAGAAGAATTCAAGTATTTGGGGATGAAGCTCAAAAGTCTAGCTGAAGCTTCTGAAAATTATCATCTAGTTCTTACAGAAAATCGGAAATTATATAATGAAGTTCAAGATTTAAAAGAAGAAGTATTCCTGGATACCCAACCACTAATTCGTTCTGTACTTGATGGGTACAATGTTTGCATATTTGCATATGGTCAAACTGGCTCAGGAAAGACATATACAATGGAAAGTCAACATAAGTACTATTTCCTTGACTTGCATACACTTGGGATTTTGAATTCTGCCCAACCAAATGGGTTGGTTGTTCCTGATGCAAGCTTGCATACCGTGAATTCAATGACGGATGTGCTGGAGTTGATGAACATTGGACTAACGAATCGGGCAACTGGTTCCACAGCCTTAAATGAAAGAAGTAGCAGATCACATAGTGTTCTTACTGTTCATGTTCGTGGCACGGATTTGGAGACCAACACTTTATTGCGTGGATGTCTACATCTTGTAGATCTTGCAGGGAGTGAGAGAGTAGAGCGTTCTGAAGCAACAGGAGATAGGCTTAAGGAGGCACAACATATAAATAAATCACTATTAGCACTTGGAGATGTGATTTTTGCTCTTGCACAAAAGAGTCCGCATGTTCCTTATAGAAATAGTAAATTGAGTCAACTTCTTCAAAGTTCCTTAGGTGGTCAAGCAAAAGCCCTCATGTTTGTACAGCTTAACCCTGACACTGCTTCATATTCTGAAACGATAAGCACCTTGAAGTTTGCCGTGAGGGTTTCAGGTGTTGAGCTAGGTGCTGCTCGTAGTAATAGAGAGGGAAGAGATGTCAAAGAACTCTTAGAGCAGGTAGCATCTCTCAAAGATGCACTTGCAAGGAAGGATGAAGAGATTGAGCGGTTGCAGCAGCTCAAGTCTAATAATCTCAATGTTGCCAAGCGGGGAATGATGGGGTATGGGTCATCATCTCCAAGGAGACATTCCACTGGAACTTCGAGGCATGGCACAAGACTTTCTGGGTCTGGGGCCTTGCGAGTTGGTGAAAAAAAAGCTTCTGACATGGACAACTGCTCAGAGTATAGTGATAAGCATTCAGAAGCTGGTTCTCATCAGTCAATGGATGATCTCAGGAACAAGCCCACTTCCCCACTATTCAAATCATCCAAAGAAGATACAAGTCAGAATGTCAATGACGACATTGATCTCTTAGGATTTGGAGATGCAGATTCTGAAGAGAGATTAAGTGATATATCTGACGGTGGTCTTTCAATGGGAACAGAAACTGATGGTTCTATCTGCAGCATTGTGGAGTACACTCTTTTCCCTGAAGATGAGAAGCCATCTGAAATCACCGCAAGTAAGAGCACAACAGCAGACAACCCGTCAGCTGTAAACAAAGAAAAATCCACTTTGGCGTCCAAAATTCCCAAAGCCGCGGAAATTCTACAAAAAGCACCAGTAAAATCTTCCAAGCTATCAATGAACAGAAGTTCCTCAAAGGTTTCCTCAAGCGTCAAGAAAACCGCTGCCGGCAGCTCAACTTCAGTGAAGGCCCCTACAAAACGATGGCAATAA 2994 0.4115 MQLEQKEQGNRGIDSLNGYHSDANPIEAFGGNHQESLVKWINSVLPHLNLPLETSEEELRAWLRDGSVLCSILDRLIPGSVGVGSYSLDEQVNIRRFLQAMDELGLPGFDLSRLEQGSVGPVLQCLEALKTHFASNVERENIQSLSRKRWDQSDLAYGAYGSEERQKFSGDSNFEHEIDGSVLSDEATLTHHVGSKSKELLQLKRGLHVDLSDDKIMELFKSNSLDVSQKLLVHVYVPSNASTQSLFNIGNRIMDDIFGRKNGDVPQSQYAAFLLRKILHVIEWRFSNQAESLKNQNNILKVREGKYQLKINALETLAAGTNEENEVVKSWLQQLKFALQVEKTKIEEKNKLDEQDVARLKQEKVRGEIEISAWKQELEMVKKAHEELRVQSELRAEECKSEYEKRIRELECGLADARNQAKKLEALIESKSLKWKNRENTYQSFINYQFGAFKELRAAMESVKDDALKTKRSYLEEFKYLGMKLKSLAEASENYHLVLTENRKLYNEVQDLKEEVFLDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMESQHKYYFLDLHTLGILNSAQPNGLVVPDASLHTVNSMTDVLELMNIGLTNRATGSTALNERSSRSHSVLTVHVRGTDLETNTLLRGCLHLVDLAGSERVERSEATGDRLKEAQHINKSLLALGDVIFALAQKSPHVPYRNSKLSQLLQSSLGGQAKALMFVQLNPDTASYSETISTLKFAVRVSGVELGAARSNREGRDVKELLEQVASLKDALARKDEEIERLQQLKSNNLNVAKRGMMGYGSSSPRRHSTGTSRHGTRLSGSGALRVGEKKASDMDNCSEYSDKHSEAGSHQSMDDLRNKPTSPLFKSSKEDTSQNVNDDIDLLGFGDADSEERLSDISDGGLSMGTETDGSICSIVEYTLFPEDEKPSEITASKSTTADNPSAVNKEKSTLASKIPKAAEILQKAPVKSSKLSMNRSSSKVSSSVKKTAAGSSTSVKAPTKRWQ 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0559 997 Coils Coil 750 780 - -
Lele52g0559 997 MobiDBLite consensus disorder prediction 961 997 - -
Lele52g0559 997 MobiDBLite consensus disorder prediction 785 871 - -
Lele52g0559 997 MobiDBLite consensus disorder prediction 919 944 - -
Lele52g0559 997 Gene3D Kinesin motor domain 563 778 IPR036961 -
Lele52g0559 997 Coils Coil 343 391 - -
Lele52g0559 997 SMART kinesin_4 385 744 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele52g0559 997 MobiDBLite consensus disorder prediction 956 997 - -
Lele52g0559 997 ProSiteProfiles Kinesin motor domain profile. 566 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele52g0559 997 SUPERFAMILY Calponin-homology domain, CH-domain 32 133 IPR036872 -
Lele52g0559 997 PRINTS Kinesin heavy chain signature 606 623 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele52g0559 997 PRINTS Kinesin heavy chain signature 530 551 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele52g0559 997 PRINTS Kinesin heavy chain signature 637 655 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele52g0559 997 PRINTS Kinesin heavy chain signature 686 707 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele52g0559 997 PANTHER KINESIN-LIKE PROTEIN KLP-3 514 551 - -
Lele52g0559 997 MobiDBLite consensus disorder prediction 924 942 - -
Lele52g0559 997 SMART ch_5 33 129 IPR001715 GO:0005515
Lele52g0559 997 Gene3D Kinesin motor domain 493 562 IPR036961 -
Lele52g0559 997 FunFam Kinesin-related protein3 573 778 - -
Lele52g0559 997 Pfam Calponin homology (CH) domain 33 134 IPR001715 GO:0005515
Lele52g0559 997 MobiDBLite consensus disorder prediction 795 811 - -
Lele52g0559 997 Coils Coil 400 434 - -
Lele52g0559 997 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 513 774 IPR027417 -
Lele52g0559 997 Coils Coil 495 515 - -
Lele52g0559 997 Pfam Kinesin motor domain 511 552 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele52g0559 997 Pfam Kinesin motor domain 570 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele52g0559 997 Gene3D - 29 137 IPR036872 -
Lele52g0559 997 MobiDBLite consensus disorder prediction 847 864 - -
Lele52g0559 997 ProSiteProfiles Calponin homology (CH) domain profile. 31 134 IPR001715 GO:0005515
Lele52g0559 997 MobiDBLite consensus disorder prediction 821 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0559 Lele-ChrLele52 3442342 3450174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0559 349 770 Calmodulin-binding Proteins AT5G65930 32.520 7.80e-48 184