Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0548 ATGCCATATATAGTCACGGGTTTAGTGTTTGGAGTTCAAGAACGGCTGAGTTAAACAGTGAGATGTAATACACCCTCCTCCCACGATAACACCCGAGTCCATCAGTTTCTTCCACCAACTGCTCATCATCGAAGCACCGTCACCGGTGGAGAGAAGGTGGTGGTGCCGGCGACGGAACCATACATAACGTTTCGGGGAGCGGGGAGGGACGTGACGGTGATAGAATGGCATGACAGGGCCAGCGACCCTGGCCCCAATGGACAACAACTACGTACTTACAGAACTGCTTCTGTTACCGTCTTAGCCAACTATTTCTCTGCCAGGAATATCAGCTTTAAGTGTGAAGATGATAGTAGAGTTTACGTGAACAATGCAGAACACGGCGCCGGCACCGATGCCGGGAATGCAGGGATGGTAAGCGGCGGCTTTTAG 432 0.5162 MPYIVTGLVFGVQERLSXTVRCNTPSSHDNTRVHQFLPPTAHHRSTVTGGEKVVVPATEPYITFRGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVLANYFSARNISFKCEDDSRVYVNNAEHGAGTDAGNAGMVSGGF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0548 143 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 51 123 - -
Lele52g0548 143 Gene3D - 49 140 IPR012334 -
Lele52g0548 143 SUPERFAMILY Pectin lyase-like 51 115 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0548 Lele-ChrLele52 3371143 3372779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0548 51 112 Carbohydrate Esterase AT5G47500 87.097 3.36e-32 115