Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0532 ATGGGGCCAATTCACAAAGCTAATGGCATTGTTAAAACGAAATTTCGACTTTTTCTTAGTCTGTTTGGTCTGATTTTAGCTGAATCGGAAGCCGTCGATATGACTCGGCGGTGTTCTCATTGCAGCCACAATGGCCATAACTCAAGGACTTGCCCGAACCGCGGTGTTAAGCTCTTTGGAGTTCGATTGACCGATGGCTCGATCCGGAAGAGTGCTAGTATGAGTAGTCTCAGCCACTATGCCGGCTCCAGCTCCGGAGCTCATCACCCTGGTTCCGTCAATCCGGGTTCCCCCGGTGACACGCCTGATCATGGTGCTGCAGCTGACGGTTACGCCTCCGAGGATTTTGTTCCTGGTTCATCGTCAGTTTCCCGGGAGAGGAAGAAGGGTGTTCCGTGGACTGAGGAGGAGCATAGATTGTTCTTACTTGGACTGCAGAAGCTTGGCAAAGGAGATTGGCGTGGAATTGCACAGAATTATGTCATATCAAGGACACCTACTCAAGTAGCAAGCCATGCTCAGAAATATTTCATCAGGCAAAGCAACGTGTCTAGGAGGAAAAGACGTTCAAGTTTGTTTGACATTGTTGCTGATGAAAATGCTGATACACCAATGGCAGAACAAGACTTCTTGCCAGCTAGTCAGCCAGAGGCTGAAACAGGAGGCAATGACCCCTTGCCAGCTCCCCCAGCCATCGACGAAGAGTGTGAATCCATGGATTCTGCTTATTCGAACGATGGAGACTCTGCCTCTTTAAAGCCAGATAGCTCACAGTCACAGTCACAGTTCCCAGTGCTATATCCTGCTTACTTTTCTCCTTTCGTCCCATTTCCTCTGCCTTACTGGTCTGGATACAGTCCAGAGCCCACCAAGAAGGAGACAGAACATGAAGTGCTGAAGCCTACTGCAGTACATTCTAAAAGCCCCATCAATGTTGATGAATTAGTTGGCATGTCAAAACTCAGTTTAGGGGACTCTATTGGTGATTCTGGCCCTTCCTCTCTTACACTAAAACTCCTCGAGGGACCCTCTCGGCAGTCAGCTTTTCATGCAACTCCCTCATATGGTAATTCAGACATGAATGGCAATGCAATCCCTGCAGTTTAA 1107 0.4842 MGPIHKANGIVKTKFRLFLSLFGLILAESEAVDMTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMSSLSHYAGSSSGAHHPGSVNPGSPGDTPDHGAAADGYASEDFVPGSSSVSRERKKGVPWTEEEHRLFLLGLQKLGKGDWRGIAQNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADENADTPMAEQDFLPASQPEAETGGNDPLPAPPAIDEECESMDSAYSNDGDSASLKPDSSQSQSQFPVLYPAYFSPFVPFPLPYWSGYSPEPTKKETEHEVLKPTAVHSKSPINVDELVGMSKLSLGDSIGDSGPSSLTLKLLEGPSRQSAFHATPSYGNSDMNGNAIPAV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0532 368 CDD SANT 132 177 IPR001005 -
Lele52g0532 368 MobiDBLite consensus disorder prediction 348 368 - -
Lele52g0532 368 Pfam Myb-like DNA-binding domain 132 177 IPR001005 -
Lele52g0532 368 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 128 180 IPR006447 GO:0003677
Lele52g0532 368 ProSiteProfiles SANT domain profile. 133 181 IPR017884 -
Lele52g0532 368 MobiDBLite consensus disorder prediction 79 131 - -
Lele52g0532 368 FunFam transcription factor MYB1R1 131 182 - -
Lele52g0532 368 SMART sant 129 179 IPR001005 -
Lele52g0532 368 Gene3D - 131 183 - -
Lele52g0532 368 PANTHER TRANSCRIPTION FACTOR KUA1 36 307 - -
Lele52g0532 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 125 181 IPR017930 -
Lele52g0532 368 MobiDBLite consensus disorder prediction 242 258 - -
Lele52g0532 368 MobiDBLite consensus disorder prediction 239 258 - -
Lele52g0532 368 MobiDBLite consensus disorder prediction 214 233 - -
Lele52g0532 368 ProSiteProfiles Myb-like domain profile. 125 177 IPR001005 -
Lele52g0532 368 SUPERFAMILY Homeodomain-like 127 182 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0532 Lele-ChrLele52 3259818 3262549 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele52g0532 Myb_DNA-binding 1.8e-11 CL0123