Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0524 ATGATGGCCAATCAAGTTGAGTTTTCCGCCCTAGAACGCATCAAATTACATCTCCTAGGTGAACCCTCTCCGGTGGCAAGTTCTCAATTTTGGTTTGAGGAAGCCAACTCTTCTATTTCAAGTTCTCAATCTCTCTGTTCCCAGTCTTCCATTTCTGATGGTAATTCCATCATGTCCGATTACTTTCCTGATGTCCTCGACTTCCCCACCAATCCCGCACCTTCATCACTAGATCAAACGAATCCGTTTGAATTCGAGTCCAAACCCCAAATAATTGACCTCGCCACGCCAAATTCCCAAATCCAAGCTTCGCAGTTCGAAACAAGGTTTCCCAAACTCGAATCGAACACGCAGGAAAGCTCGACTTCAAACAGGTGCCTGTTGGATTTCGACCCGAGACCTCATGAATCGCAGAAGAAATCTCCTTCGAGTAGGAAACCGTCGTTGCAAATCTCGCTTCCAAAGAAAACCGAGTGGATCCAGTTTGGGATTCCGGAGCAGCAAGAGGAGGCAGCTGGGGGGTTGGAGCAGAAAAACCCAAACGAAGTCGAGAAAAGGCACTACAGAGGTGTCCGACGGAGGCCGTGGGGCAAGTATGCGGCGGAGATCCGAGACCCAAACAAGCGGGGATCCAGGGTGTGGTTGGGAACATTCGACACAGCTATCGAAGCCGCCAAAGCCTACGATCGAGCTGCCTTCAAGCTTCGCGGCTCCAAAGCCATCCTAAACTTCCCTCTAGAAATAGAAACATCGAGCTCGGTGATTAGCTCCGGCGAGGGAAAACGCCGCCGTCAAGACGAAGAGGAGGCGGCCGAGGTGGAGGTAAAGGCGGTGGTGAAGAAGGCGAAAACGACGACGGAATCGGAGTCTCAGGAGAAGTATAGAAAGGACGCTCCGTTAACACCGTCTAATTGGAAGGGGTTCTGGGACAACGATTTAAACGGGATTTTCAGTGTGCCGCCGTTATCACCTCTCCCTCCATTGGGTTGTCCACAGCTTATGGTTGTATGA 1011 0.5084 MMANQVEFSALERIKLHLLGEPSPVASSQFWFEEANSSISSSQSLCSQSSISDGNSIMSDYFPDVLDFPTNPAPSSLDQTNPFEFESKPQIIDLATPNSQIQASQFETRFPKLESNTQESSTSNRCLLDFDPRPHESQKKSPSSRKPSLQISLPKKTEWIQFGIPEQQEEAAGGLEQKNPNEVEKRHYRGVRRRPWGKYAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEIETSSSVISSGEGKRRRQDEEEAAEVEVKAVVKKAKTTTESESQEKYRKDAPLTPSNWKGFWDNDLNGIFSVPPLSPLPPLGCPQLMVV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0524 336 ProSiteProfiles AP2/ERF domain profile. 187 245 IPR001471 GO:0003700|GO:0006355
Lele52g0524 336 MobiDBLite consensus disorder prediction 111 127 - -
Lele52g0524 336 MobiDBLite consensus disorder prediction 281 301 - -
Lele52g0524 336 MobiDBLite consensus disorder prediction 281 296 - -
Lele52g0524 336 PRINTS Ethylene responsive element binding protein signature 188 199 IPR001471 GO:0003700|GO:0006355
Lele52g0524 336 PRINTS Ethylene responsive element binding protein signature 227 247 IPR001471 GO:0003700|GO:0006355
Lele52g0524 336 SMART rav1_2 187 251 IPR001471 GO:0003700|GO:0006355
Lele52g0524 336 FunFam Ethylene-responsive transcription factor 2 186 247 - -
Lele52g0524 336 Gene3D AP2/ERF domain 186 247 IPR036955 GO:0003700|GO:0006355
Lele52g0524 336 CDD AP2 187 245 IPR001471 GO:0003700|GO:0006355
Lele52g0524 336 SUPERFAMILY DNA-binding domain 187 247 IPR016177 GO:0003677
Lele52g0524 336 MobiDBLite consensus disorder prediction 111 150 - -
Lele52g0524 336 Pfam AP2 domain 187 237 IPR001471 GO:0003700|GO:0006355
Lele52g0524 336 PANTHER DNA-BINDING DOMAIN 126 292 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0524 Lele-ChrLele52 3195463 3196473 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0524 2 336 AP2-EREBP Transcription Factor Family AT5G47230 42.899 9.04e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele52g0524 AP2 8.8e-16 CL0081