Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0523 ATGCAAACCCACGACGCCATGCCCGAACCCACGAGCTCCGACTCCAACTTAGAATTTTTGGAATCCATTCGCCGTCACTTGCTTGGTGAATCCGACGCTGCTCCGGCGGCTAAATCCAATTTCAACTTATTGGACCCGTGCCTGAGTTATCATTGTAGCGAATTGCCTCTCAGACAGGACGAACCCGAAGACATGCTGCTCTTCGGGGTACCCCGGGACGCGCTCCAAGGCTGGTGGGCCCCAACTATGAACGTCAGCCCACCGGAAAGCGTCGGCTCGGCTTTGCCATCCACCATTACGGTGAAACAGGAGCAAGATGTAGTAGAGGTTGCGCTTGCGGCCCAGCGAGAGAAGGTGAAGGAGAAGGTGAGGCATTACCGAGGCGTGCGTCAACGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGAGACCCGGCTAAGAATGGAGCTCGGGTATGGCTGGGGACATTTGAGACGGCGGAGGATGCGGCTCTGGCATACGACCGAGCCGCTTACAGGATGCGGGGCTCGCGGGCTGTAGTTAATTTTCCGCTTAGGGTGAACTCGGGTGAACCGGAGCCGGTGAGAGTGAGGGCGAAGCGGTCTTCAATGGATGCAATGTCGTCGGGTTCGGAGAGTGGAAAGCGAAAGGAGAAGGTGGCGAGAAGGGAAGCTGGAAGTGAAGTGGCATCTTGTACAAATGGACAACACCTATTGGTCAGCGAATATGCTTAA 732 0.5683 MQTHDAMPEPTSSDSNLEFLESIRRHLLGESDAAPAAKSNFNLLDPCLSYHCSELPLRQDEPEDMLLFGVPRDALQGWWAPTMNVSPPESVGSALPSTITVKQEQDVVEVALAAQREKVKEKVRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRAVVNFPLRVNSGEPEPVRVRAKRSSMDAMSSGSESGKRKEKVARREAGSEVASCTNGQHLLVSEYA 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0523 243 PRINTS Ethylene responsive element binding protein signature 126 137 IPR001471 GO:0003700|GO:0006355
Lele52g0523 243 PRINTS Ethylene responsive element binding protein signature 149 165 IPR001471 GO:0003700|GO:0006355
Lele52g0523 243 FunFam Ethylene-responsive transcription factor 2 124 184 - -
Lele52g0523 243 MobiDBLite consensus disorder prediction 192 230 - -
Lele52g0523 243 ProSiteProfiles AP2/ERF domain profile. 125 183 IPR001471 GO:0003700|GO:0006355
Lele52g0523 243 SUPERFAMILY DNA-binding domain 125 185 IPR016177 GO:0003677
Lele52g0523 243 Pfam AP2 domain 125 175 IPR001471 GO:0003700|GO:0006355
Lele52g0523 243 PANTHER DNA-BINDING DOMAIN 105 216 IPR044808 GO:0003700|GO:0009873
Lele52g0523 243 CDD AP2 125 183 IPR001471 GO:0003700|GO:0006355
Lele52g0523 243 SMART rav1_2 125 189 IPR001471 GO:0003700|GO:0006355
Lele52g0523 243 Gene3D AP2/ERF domain 124 186 IPR036955 GO:0003700|GO:0006355
Lele52g0523 243 MobiDBLite consensus disorder prediction 210 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0523 Lele-ChrLele52 3187077 3187808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0523 13 196 AP2-EREBP Transcription Factor Family AT4G17500 50.685 1.93e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele52g0523 AP2 1.2e-14 CL0081