Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0522 ATGGCTGTTCCCTATATCTTCTTCTTCGCCCTTTTCTTGCTTCAACTTCATTTGGCTTTTGGGGACGTTGCTTTGGACACGACACTCTCCACCAACGATGAAAATCCTTCATGGCTCTCCTCTTCTGGTGAATTCGCTTTCGGATTCCGGCGAATCTACAACAGCACAAACCTCTTCTTGCTTGCCATCTGGTTCTACAAAATTCCAGATCAAACCATTGTCTGGAACGCAGACATCCAATCTCCCATACAACTAGGATCGAAGGTTCAGCTCCTTACAAGGGGCCTCTCACTCATTAACCCCCAAGGTGAAGTTATGTCTGTGTGGCCAACTGGACTACAAGGAGGAGTCTCCTATGCAGAAATGCGTAACGATGGAAATTTTGTTCTGGTGGCATCCTCCAATTCTTCTTATTTCTGGCAAAGTTTCAACAATCCTACTGATACACTCTTACCCACACAAACCTTGGATCTGAACAGTAAGCTAGTTTCTCGATTGTCACCTACCAATCACACTAAGGGAAGGTTCGAGCTTTATTTTGGTAACGGCAATCTCTCGTTAACTCAGAATGGGTGGCCGACGGAATCTCGTTACGACAAGTATTTTGATATTAGCACGAGTTCTAATGACTCTGCTTCGAAACTAATCTTCAATTCATCAGGAAATATTTATGTAGAGAAAAAGAGTGGAGATCAAACAGACGTTATTGGATTGGGTGGCTCAGTAGGTCTTAATGTTAGCAGATATTATTACAGGGCTACGCTTGATTACCATGGAGTTTTTTCTTTGTATTCCCATCCCAAGGAATCCAATGTGGATCAAGTTTGGTCAAATATGGGGTATGTTCCCGACAACATTTGTGATGCAATATTTAGTGACATGGGTAGTGGTTCGTGTGGCTACAATAGCTACTGCACTTGGGATGACAACAAGAAGAGGCCAACTTGTACGTGTCCAGAAGGATATTCTTGGGTGGATGCGAACGACGAATTTGCAGGATGCCTACCTGATTACTCCTTTGGCTGTGGTGCTGATGATTTGCGATCACGTGAAAATCCGGAGGAGGCATATGAGATGAAGCCTTTGCCAAATGTGACTTGGCCTCTTGGAGATTATGAAAGGTTGAACGATTATACCCGGGATGAATGTGTACGATCTTGCTTGCATGACTGCAATTGTGCAGTTGTTATCTCTAACAATGCAAAGGATTGTTGGAAGAAAAGATTTCCCCTTTCTAACGGAAGAGTATCTGCAATTGGCGGTACAATTGCATTGTTGAAAATAAGAATTCAACCACTGGTGGTGGGTAATCTTAATCTGGAAAAGGAAGATCGGGTCCAACCTGCTCTATTAGGCTCGCTAATTGGCTCCCTTGTTGTTAATACTTTATTAGTGGCCACAGTTGTTTTGATTATTCTGTTTAAGCCCAAAAAGAGCAGGACCCTTACAATGATAAGAGGAACGAGAGGATACGTGGCCCCGGAATGGTTCAAAAGTATTCCGGTGACTACTAAGGTGGATGTTTATAGTTATGGCGTGATGTTGCTAGAGATAATCTGTTGCAGAAGAAGCGTGGAGATGGATATGGATGAACAAGTGGAGGAAAACGAGGCAAAGGCAATACTAACAGATTGGGCATATGATTGCTATATGGAGAGAAGAACAGAGATTCTGGTGGAGAATGATAAGGAGGCCATGGCTGACATGGGGAGGGTGAAGAAATGGGTGACGATAGCGTTATGGTGCATTCAAGAGAATCCAGAAATAAGGCCCAGCATGAAGACAGTGATGCGAATGTTGGAAGGCGTTGTTGAAGTTCCAACTCCTCCATCACCTTCTTCGTCCTTCATCCCAATAGTTTGA 1863 0.4353 MAVPYIFFFALFLLQLHLAFGDVALDTTLSTNDENPSWLSSSGEFAFGFRRIYNSTNLFLLAIWFYKIPDQTIVWNADIQSPIQLGSKVQLLTRGLSLINPQGEVMSVWPTGLQGGVSYAEMRNDGNFVLVASSNSSYFWQSFNNPTDTLLPTQTLDLNSKLVSRLSPTNHTKGRFELYFGNGNLSLTQNGWPTESRYDKYFDISTSSNDSASKLIFNSSGNIYVEKKSGDQTDVIGLGGSVGLNVSRYYYRATLDYHGVFSLYSHPKESNVDQVWSNMGYVPDNICDAIFSDMGSGSCGYNSYCTWDDNKKRPTCTCPEGYSWVDANDEFAGCLPDYSFGCGADDLRSRENPEEAYEMKPLPNVTWPLGDYERLNDYTRDECVRSCLHDCNCAVVISNNAKDCWKKRFPLSNGRVSAIGGTIALLKIRIQPLVVGNLNLEKEDRVQPALLGSLIGSLVVNTLLVATVVLIILFKPKKSRTLTMIRGTRGYVAPEWFKSIPVTTKVDVYSYGVMLLEIICCRRSVEMDMDEQVEENEAKAILTDWAYDCYMERRTEILVENDKEAMADMGRVKKWVTIALWCIQENPEIRPSMKTVMRMLEGVVEVPTPPSPSSSFIPIV 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0522 620 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 29 465 - -
Lele52g0522 620 SMART blect_4 26 146 IPR001480 -
Lele52g0522 620 ProSiteProfiles Bulb-type lectin domain profile. 25 143 IPR001480 -
Lele52g0522 620 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 166 IPR036426 -
Lele52g0522 620 Pfam D-mannose binding lectin 72 161 IPR001480 -
Lele52g0522 620 Gene3D - 24 145 IPR036426 -
Lele52g0522 620 SUPERFAMILY Protein kinase-like (PK-like) 480 614 IPR011009 -
Lele52g0522 620 Gene3D - 146 276 IPR036426 -
Lele52g0522 620 Gene3D Transferase(Phosphotransferase) domain 1 461 608 - -
Lele52g0522 620 Pfam Protein kinase domain 479 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0522 Lele-ChrLele52 3180324 3182723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0522 478 616 Receptor kinase-like Gene Family AT3G53380 32.624 5.12e-20 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele52g0522 Pkinase 3.7e-11 CL0016