Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0507 ATGAGTGGGGCGTTGATGGAGCTTCATTCTAAATACCAGGTGGCCCTTGTTTGTGTGCTGCTCTTACCTGCACTATGCTTCTCCCAAGGCTTCACTGACTCCAGAGCCACCTTTTATAGTACCCCCGATGGCTATGGAACTCCAACCGGAGCTTGTGGATATGGAGATTACGGCAGAACTGTAAACCATGGCATGGTTGCCGGCGTGTCTGGCTTATGGAGAGGTGGCGCTGGATGTGGTGCTTGCTACCAAGTAAGGTGCAAGAATTCGAGATTATGCGGTAACTACGGCGCCATGGTGGTGGCAACAGACTACGGTGCAGGAGACAGAACAGACTTCATTATGAGTCCCAATGCTTTCAAAGCTCTGGGACGAAACCCAAGTGCATCGGCGGAGCTGAAGAAATACGGCGTCGTAGACATAGAATACAGGAGGGTGCCCTGCACATATGCAGGTAAAAACGTGCGTATCAAGATCCACGAGTCCAGCAATTACCCATACTACCTTGCTCTTGTAATTCAATACGTGCCTGGAGTGAACGACGTCACTGCCGTTGAGATATACGACAATGATAGGCATGAATGGAAGCCAATGAGAAGAGCGTACGGGGCAGTGTTTGATATAGCCGGCGCACCAAGCGGACCATTAACGCTGAGGCTGCAGCTCAGTGGAAGAAGAGGATGGCTACAGTCGACCAAGAGTGCAATTCCTAAGGATTGGAAGATTGGAGCTTCTTACGACTCTCAAGTTCATGTCTAA 759 0.502 MSGALMELHSKYQVALVCVLLLPALCFSQGFTDSRATFYSTPDGYGTPTGACGYGDYGRTVNHGMVAGVSGLWRGGAGCGACYQVRCKNSRLCGNYGAMVVATDYGAGDRTDFIMSPNAFKALGRNPSASAELKKYGVVDIEYRRVPCTYAGKNVRIKIHESSNYPYYLALVIQYVPGVNDVTAVEIYDNDRHEWKPMRRAYGAVFDIAGAPSGPLTLRLQLSGRRGWLQSTKSAIPKDWKIGASYDSQVHV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0507 252 Gene3D - 149 249 IPR036749 -
Lele52g0507 252 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 167 248 IPR007117 -
Lele52g0507 252 Gene3D - 24 148 IPR036908 -
Lele52g0507 252 PANTHER EXPANSIN-B3 19 251 - -
Lele52g0507 252 Pfam Expansin C-terminal domain 155 232 IPR007117 -
Lele52g0507 252 SUPERFAMILY PHL pollen allergen 153 248 IPR036749 -
Lele52g0507 252 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 153 IPR007112 -
Lele52g0507 252 PRINTS Expansin/Lol pI family signature 69 87 IPR007118 GO:0005576
Lele52g0507 252 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Lele52g0507 252 PRINTS Expansin/Lol pI family signature 136 152 IPR007118 GO:0005576
Lele52g0507 252 PRINTS Expansin/Lol pI family signature 195 209 IPR007118 GO:0005576
Lele52g0507 252 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Lele52g0507 252 SUPERFAMILY Barwin-like endoglucanases 16 152 IPR036908 -
Lele52g0507 252 Pfam Lytic transglycolase 66 143 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0507 Lele-ChrLele52 3082116 3085949 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0507 19 250 Expansin Gene Family AT4G17030 52.340 2.07e-83 248