Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0490 ATGACGGTCATTAATCAGTCAGTGCCCCTACGAGGCTTCCATTGCAAGCGACTCTTGAATGTGCGACCTTCGGAGAAACTTGTGAAGGTGGACATGGAGGAACGGTACGAGCCATTGAAAGAACTTGGTTCTGGGAATTTCGGAGTGGCCAGGTTGGTGAGAGACAAGATCACGAAGGAGCTTGTTGCTGTTAAGTACATAGAAAGAGGGAAGAAGATTGATGAGAAAGTTCAGAGGGAGATCATTAACCACCGATCTTTAAGGCATCCAAATATTATCAAGTTTAGAGAGGTCTTGCTGACCCCAACCCATTTAGCCATTGTCATGGAGTATGCTGCAGGCGGTGAACTCTTTGAGAGAATATGCAGTGCGGGTCGATTCAGCGAAGATGAGGCGAGATTTTTCTTCCAGCAACTAATATCTGGAGTTAGTTACTGTCACTCAATGCAAATTTGTCATAGAGATTTGAAATTGGAAAACACTCTCTTGGATGGAAGTCCAACACCTCGACTCAAAATATGTGACTTTGGTTACTCCAAGTCTGCTATACTGCACTCTCAACCGAAATCTACTGTTGGAACTCCTGCTTACATTGCTCCGGAAGTTCTGTCTCGAAAGGAGTACGATGGAAAGATTGCGGATGTTTGGTCATGTGGTGTAACGCTTTATGTCATGTTGGTGGGAGGATACCCATTTGAAGATCCTGAAGATCCTAGGAATTTCCGAAAGACCATTGGAAGAATAATGGGTGTTCAATACTCCATTCCAGACTATGTACGTGTCTCTGCAGATTGCAGACATCTTCTTTCTCGCATCTTTGTCGCCAATCCTGCCAAAAGGGTAACGATCCCAGAGATAAAACAACACCCTTGGTTTTTGAAGAACTTGTCTAAAGAGATAAAGGAAGATGAGAAAAAAGTTGATGAGGAAGCAGAGAAGGATCATCTGAGCCAGAGCGTTGAAGAAATAATGCGAATAGTACAAGAGGCAATGACACCGGGGAAACATTCCAAGGGCGGCGTAGGGCAAGCTGGTGGTGGAGGATCATTGGACGGTGAAGATGATGATGAAGAATCAGAACTTGATGTTAGTGGTGACTATGCTACAACAACATAG 1116 0.4427 MTVINQSVPLRGFHCKRLLNVRPSEKLVKVDMEERYEPLKELGSGNFGVARLVRDKITKELVAVKYIERGKKIDEKVQREIINHRSLRHPNIIKFREVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPTPRLKICDFGYSKSAILHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGGYPFEDPEDPRNFRKTIGRIMGVQYSIPDYVRVSADCRHLLSRIFVANPAKRVTIPEIKQHPWFLKNLSKEIKEDEKKVDEEAEKDHLSQSVEEIMRIVQEAMTPGKHSKGGVGQAGGGGSLDGEDDDEESELDVSGDYATTT 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0490 371 Coils Coil 293 313 - -
Lele52g0490 371 Gene3D Phosphorylase Kinase; domain 1 18 111 - -
Lele52g0490 371 PANTHER SERINE/THREONINE KINASE 34 318 - -
Lele52g0490 371 FunFam Serine/threonine-protein kinase SRK2E 112 300 - -
Lele52g0490 371 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Lele52g0490 371 SMART serkin_6 36 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0490 371 Gene3D Transferase(Phosphotransferase) domain 1 112 300 - -
Lele52g0490 371 Pfam Protein kinase domain 36 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0490 371 FunFam Serine/threonine-protein kinase SRK2E 13 111 - -
Lele52g0490 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Lele52g0490 371 CDD STKc_SnRK2 35 291 - -
Lele52g0490 371 SUPERFAMILY Protein kinase-like (PK-like) 34 296 IPR011009 -
Lele52g0490 371 ProSiteProfiles Protein kinase domain profile. 36 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0490 371 MobiDBLite consensus disorder prediction 328 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0490 Lele-ChrLele52 2984166 2987456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0490 35 297 CBL-interacting serine-threonine protein kinases AT4G24400 42.647 1.03e-66 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele52g0490 Pkinase 5.5e-71 CL0016