Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0480 ATGAAGTGCTGCTTGATCAAATTTAAAAGAGGATCAAAATCCTCCTCAGAATCGCAGAAGAATCATCCGGGTTCAAATCACGCCGTGAGTTCACCAAGTTCTCTGCCATCGCCGAGAACCTTAACAGAATTGTACAAAGAGAAAGAGCACAATTTGAGAGTTTTCACATCGCAAGAGCTCAGGGAGGCAACGAATGATTTAAATAGGATGCTGAAGATTGGAGAGGGGGGTTTCGGGAGCGTTTATAAAGGTACAATTAGGTCTCAAGATGGTCAAGGTGATCCTATTGTTGTTGCGATAAAAAGCCTCAACACCCGTGGCTTTCAGGGGCATAAACAATGGCTGGCAGAGGTTCAATTTCTTGGCATTGTTTATCACCCAAATTTGGTAAAACTATTGGGATACTGCTCTGAGGATGGAGAAAGAGGAATTCAACGGCTGTTAGTTTATGAGTTCATGCCCAACAAGAGCCTGGAGGATCATCTTTTCAGACGGGATATTCCCACCTTGCCGTGGAAAACAAGATTGAAGATCATGCTCGGTGCTGCCCAAGGATTACTTTATCTACACGAGGAATTAGAGATTCAGGTAATATACCGAGATTTCAAATCTTCCAATGTTTTATTGGACATGAACTTCCATCCAAAGCTTTCAGATTTTGGTCTCGCTAGGGAAGGTCCAATTGGTGATAAGACTCACGTGTCCACTGCGGTGGTCGGGACACATGGATATGCTGCCCCAGAATATATAGAAACAGGCCACCTCAAAGTTCAGAGTGATATATGGAGTTTTGGTGTGGTATTATATGAGATGCTTACAGGGAGGCGATCATTAGATAGAAGACGACCGAAAGAACAGAAGCTTCTAGATTGGGTTAAACAGTATCCTGCTGATAGTAGGAGGTTCAGCATGATAATGGACCCTCGACTCAGAAATGAGTACTCACATGGTGCTGCTCGGAAAGTAGCCAAGTTGGCAGACAGATGCTTAAACAAGAAACCTGAAGAAAGGCCATCCATGAGACAGGTAGTGGAAAGCTTGAAACAAGCATTGCAGTATTCAGAAACTTCAAAAATGGCTCCTGAATCACCTCGACCTAAATTGGTTCCAAAAAGCAAATAG 1122 0.4332 MKCCLIKFKRGSKSSSESQKNHPGSNHAVSSPSSLPSPRTLTELYKEKEHNLRVFTSQELREATNDLNRMLKIGEGGFGSVYKGTIRSQDGQGDPIVVAIKSLNTRGFQGHKQWLAEVQFLGIVYHPNLVKLLGYCSEDGERGIQRLLVYEFMPNKSLEDHLFRRDIPTLPWKTRLKIMLGAAQGLLYLHEELEIQVIYRDFKSSNVLLDMNFHPKLSDFGLAREGPIGDKTHVSTAVVGTHGYAAPEYIETGHLKVQSDIWSFGVVLYEMLTGRRSLDRRRPKEQKLLDWVKQYPADSRRFSMIMDPRLRNEYSHGAARKVAKLADRCLNKKPEERPSMRQVVESLKQALQYSETSKMAPESPRPKLVPKSK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0480 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Lele52g0480 373 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 153 361 - -
Lele52g0480 373 ProSiteProfiles Protein kinase domain profile. 67 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0480 373 SUPERFAMILY Protein kinase-like (PK-like) 49 347 IPR011009 -
Lele52g0480 373 MobiDBLite consensus disorder prediction 10 38 - -
Lele52g0480 373 PANTHER OS01G0588500 PROTEIN-RELATED 23 351 - -
Lele52g0480 373 Gene3D Phosphorylase Kinase; domain 1 40 152 - -
Lele52g0480 373 ProSitePatterns Protein kinases ATP-binding region signature. 73 101 IPR017441 GO:0005524
Lele52g0480 373 MobiDBLite consensus disorder prediction 352 373 - -
Lele52g0480 373 MobiDBLite consensus disorder prediction 17 38 - -
Lele52g0480 373 Pfam Protein kinase domain 70 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0480 373 CDD STKc_IRAK 73 349 - -
Lele52g0480 373 Gene3D Transferase(Phosphotransferase) domain 1 153 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0480 Lele-ChrLele52 2931810 2933624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0480 9 347 Glycoside Hydrolase AT3G07070 42.442 6.00e-89 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele52g0480 Pkinase 3.8e-48 CL0016