Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0451 ATGGGTTGCTTAAACTCTAAAACAGCTCATCTTCACTCCCCTGACGATCCCTCTGCATTCCCTGACGCCAACAAACCTGATCCAGCTAATGGGGATGATGTTGATCAAGAATGTCAAGTCCCAGCATTCAAAGAGTTCAGTCTCAATGAACTCCGAAGGGCTACGAACGAGTTCAGCACAAATTACATAGTGTCGGAAAGTGGCGAGAAAGCTCCCAATGTGGTTTACAAAGGGAAGCTCGAGAATAATCGTTTAGTCGCTATTAAACGCTTCTCTAAACAGTCTTGGCCTGACGCCCAGCAATTTATGGCAGAGGCAGCTGGAGTTGGTAAAGTGAGGCACAAGAGAATGGTGAATCTAATTGGTTGCTGTGCTGAAGGAGACGAACGGCTTTTGGTGTCAGAGTACATGCCAAACGATACATTATCAAAGCATCTCTTTCATTGGGACAAGCAGCCATTGCCATGGGAAATGCGCGTAAGAGTTGCATATCATGTAGCGCAGGCACTTGATCATTGTAGCATGGAAAATCGCAAAATATATCATGATTTGAATGCATACAGGATTCTTTTTGATGAGGAAGGTGACCCCCGATTTTCAAGTTTTGGGCTTATGAAAAATAGTCGAGATGGGAAAAGCTACAGTACCAACTTAGCATATACTCCACCTGAGTTTTTGCGGACAGGCAGGATCATTCCAGAGAGTGTAATCTACAGTTATGGAACAGTTCTTTTGGATCTTTTGAGCGGCAAGCATATTCCTCCAAGCCACGCTCTTGATCTGATTAGGGGTAAAAACGCCTTGTTGCTGATGGACTCGTCCCTAGAAGGGCAATATGCGAATGATGATGCTACAAAGTTGGTTGAACTTGCTTCAAAATGTCTTCAGTTTGAGGCTAGAGAACGCCCGGATATTAAGTTTCTTCTTACAGCAGTTGCACCTCTTCAAAAGCAGAAAGAGGTAGCATCTCATGCGTTGATGGGCCTGACTAAAAATACAGCGGTTCTACCAACCATGCTTTCACCCCTAGGAAAGGCTTGTGCAAGGATGGATCTCACAGCTGTGCATGATATATTGCTAAAAACAGGTTATAAAGATGAAGAAGGTGCTGAGAATGAGCTTTCATTCCAAGAGTGGACACAACAAGTGCAAGAGATCTTAAACACAAAAAAATTTGGGGATATTGCATTCAGAGACAAGGATTTCAAGAACGCAATTGAGTATTATTCTAAGTTGGTGGTGGTGATGTCAGTTCCTTCGGCAACCGTATTCGCGAGAAGAGCGTTCTCCTACTTGATGAACGAGCAGGCTGAGCTGGCGTTAAGGGATGCGATGCAGGCACAGGTGTGCATTCCTGATTGGCCAACGGCATTCTACCTGCAGGCACTTGCTCTGTCCAAGCTGGGAATGGAGACTGATGCTCAGGATATGCTTAATGATGGAGCTGCCTTTGAAGCCAAGAGATCTAACAGTTGGCGTGGTTAA 1485 0.4478 MGCLNSKTAHLHSPDDPSAFPDANKPDPANGDDVDQECQVPAFKEFSLNELRRATNEFSTNYIVSESGEKAPNVVYKGKLENNRLVAIKRFSKQSWPDAQQFMAEAAGVGKVRHKRMVNLIGCCAEGDERLLVSEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSMENRKIYHDLNAYRILFDEEGDPRFSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNALLLMDSSLEGQYANDDATKLVELASKCLQFEARERPDIKFLLTAVAPLQKQKEVASHALMGLTKNTAVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQEILNTKKFGDIAFRDKDFKNAIEYYSKLVVVMSVPSATVFARRAFSYLMNEQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAQDMLNDGAAFEAKRSNSWRG 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0451 494 MobiDBLite consensus disorder prediction 1 35 - -
Lele52g0451 494 Pfam Protein tyrosine and serine/threonine kinase 74 309 IPR001245 GO:0004672|GO:0006468
Lele52g0451 494 ProSiteProfiles Protein kinase domain profile. 61 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0451 494 SUPERFAMILY TPR-like 389 483 IPR011990 GO:0005515
Lele52g0451 494 Gene3D Phosphorylase Kinase; domain 1 32 136 - -
Lele52g0451 494 FunFam probable serine/threonine-protein kinase At4g35230 33 136 - -
Lele52g0451 494 Gene3D Transferase(Phosphotransferase) domain 1 138 330 - -
Lele52g0451 494 FunFam probable serine/threonine-protein kinase At5g41260 138 329 - -
Lele52g0451 494 Gene3D Tetratricopeptide repeat domain 384 493 IPR011990 GO:0005515
Lele52g0451 494 FunFam probable serine/threonine-protein kinase At4g35230 384 493 - -
Lele52g0451 494 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 31 489 IPR045845 GO:0004672|GO:0009742
Lele52g0451 494 SUPERFAMILY Protein kinase-like (PK-like) 41 311 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0451 Lele-ChrLele52 2671128 2675037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0451 14 315 Glycoside Hydrolase AT3G07070 33.538 8.13e-44 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele52g0451 PK_Tyr_Ser-Thr 3e-27 CL0016