Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0448 ATGGGAAGCGGACTTTCCAGCCTCCTTCCTTGCTGCAAACCGGCTAACCGGACCACCAGCCAACCGGATCCACAGGAAGTGATCTTTGCCCCCACTGAGCCCTTGGACGAAACCCTAGGCCACTCCTTCTGCTACGTTAGATCTTCTGCTCGCTTTCTTTCCCCCACTCACTCGGATCGATTCGTCTCGCCTTCTAACTCCCTCCGTTTTTCTCCATCTCATGAACCCGTATCGAGAGCCCGACCCGATTTGCCCGAAACCGTCTTCAAGGCCATTTCCGGAGCTTCCGTCAGCGCCAATAGTTGCACTCCCAAAACTGTTTTCCAGCTGGACAATATCCCCGATGATGTTGCGGACTGTGCCGCTGGCGGCGGTGTGAGGGGAAACATTGTGAATGGCTTCGAGAGCACATCGTCGTTTAGTGCTCTCCCGCTTCAGCCAGTCCCCAGGGGGGGTGACCCCTCAGGTCCGGTAGAGAGGGGAGCCTTCTTTCTGTCTGGCCCAATTGAGCGCGGCGCCCTCTCTGGGCCTCTAGAACCCAACGCCTCCACCGAAGGGGTAGGCGGCGTCCCTTTCTCGGCGCCTCTTGGGGGCTTTTATGCCAAAAAGAAGCGGAAGAGGGGCATTCCAGGGTTCCGGAAGGCGTTCCATGGGAACCTTTCGGAGAAGAAGCGGCCGTGGGTTGTGCCAGTGTTGAATTTCGTAGGAAGAAAGGATGTTCCGGCAAGCGAAGAGAAATCGGAGATAAAGAGTGAGAGTAATGTACAGTGGGCACTTGGGAAGGCGGGAGAGGATCGGGTACATGTAGTCGTCTCGGAAGAGCACGGCTGGTTGTTTGTTGGGATATACGACGGCTTCAATGGCCCTGACGCGCCGGAATTTCTGATGGGTCATCTTTATCGTGCAGTGTACAATGAATTGCAGGGTCTGTTTTGGGAATCTGAAGAAGCGGAAGAAACTAACCCATCGACCGCGCCTGCCGATAATGCATTACTTAGAGAACAATCTGATCCATCGATTGAAATCAATCACAGAGATTTAAAAAATGAGGGGAAAGTATCTGTGAGTGAGGACTTAAATTCTTTGCCGGTTGATCGAGAATCAGCAAAGAGAGTAACGTTTCAAGCAGACGGAACGGAAAGTAGGCGGCGTAGATTATGGGAGTTACTCGCCGAAGCTGATGCTGAAGACGGGCTTGATCTTTCAGGGTCAGATAGATTTGCATTTTCCGTTGATGATGCTCTGAGCGTAAGCTATGCGGGCTCTGCAGTTAGCAGACGGTGGCTATTATTATCGAAGTTGAAACATGGATTATCAAAACATAAGGAGGGTCAAGGTAGCAAGTTGTTTCCCTGGAAACTCGGCACGGAAGATAAAGAGAAGGTTGAGGTAGAAAATCGGGCTGAAGAAAGGCCATCCCGTGGTAATAGGAGGCGGAAAGTGGGTCCCGTGGATCATGATTCGGTTTTGAGAGCATTATCTAGGGCTCTTGAATTGACCGAACTTGCATACTTGGATATGACGGATAAGATTCTTGATACAAACCCGGAGATCGCTTTAATGGGGTCATGCCTTTTAGCTGTTTTGATGAGGGATGAAGATGTGTACGTGATGAATGTGGGAGATAGCCGAGCCATTGTTGCACAGTATGAGCCCAAAGAGTTTAATTCTAGAGTGGAATTGGAGAGCAAAGGAGATAAGGGGTCAAGCACAGAGAGCATAGTTGAGGAGTCCTTAGCTCCTGGTGAAAGCGCAAACAGGTCGGGGATTGAGGGTCCTGCTCAAGAAATGGGGTTGGTTGCATTGCAGCTGTCCACTGACCACAGCACAAGCATTGAAGAGGAAGTCATTAGGATTAAGAATGAACATCCAGATGATAACCAATGCATTGTAAATGACAGAGTTAAAGGTCGTCTTAAGGTTACCAGAGCATTTGGGGCAGGATTTTTGAAACAGCCAAAGTGGAATGATCCTCTACTGGAAATGTTTCGTAATGAATATATTGGAACTGCTCCATATATATCCTGCTGTCCTTCGCTACGTCATCATAGATTATGCCCAAGAGATCAGTTCTTGATCCTCTCATCTGATGGGCTGTATCAATATCTAAGCAATCAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGGAAAGTTTCCTGATGGAGATCCTGCACAACATTTGATTGAGGAGCTTCTCCTCCGTGCAGCGAAGAAAGCTGGAATGGATTTACATGACTTGTTGGATATCCCACAAGGAGATAGGAGGAAATACCATGATGATGTTACTGTCATGGTGATATCACTTGAAGGCCGAATCTGGAAATCATCAGGAAAGTATCTGTGA 2346 0.4893 MGSGLSSLLPCCKPANRTTSQPDPQEVIFAPTEPLDETLGHSFCYVRSSARFLSPTHSDRFVSPSNSLRFSPSHEPVSRARPDLPETVFKAISGASVSANSCTPKTVFQLDNIPDDVADCAAGGGVRGNIVNGFESTSSFSALPLQPVPRGGDPSGPVERGAFFLSGPIERGALSGPLEPNASTEGVGGVPFSAPLGGFYAKKKRKRGIPGFRKAFHGNLSEKKRPWVVPVLNFVGRKDVPASEEKSEIKSESNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGHLYRAVYNELQGLFWESEEAEETNPSTAPADNALLREQSDPSIEINHRDLKNEGKVSVSEDLNSLPVDRESAKRVTFQADGTESRRRRLWELLAEADAEDGLDLSGSDRFAFSVDDALSVSYAGSAVSRRWLLLSKLKHGLSKHKEGQGSKLFPWKLGTEDKEKVEVENRAEERPSRGNRRRKVGPVDHDSVLRALSRALELTELAYLDMTDKILDTNPEIALMGSCLLAVLMRDEDVYVMNVGDSRAIVAQYEPKEFNSRVELESKGDKGSSTESIVEESLAPGESANRSGIEGPAQEMGLVALQLSTDHSTSIEEEVIRIKNEHPDDNQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDPLLEMFRNEYIGTAPYISCCPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSQVESFMGKFPDGDPAQHLIEELLLRAAKKAGMDLHDLLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0448 781 MobiDBLite consensus disorder prediction 463 482 - -
Lele52g0448 781 PANTHER PROTEIN PHOSPHATASE 2C 245 768 IPR015655 GO:0004722|GO:0006470
Lele52g0448 781 SUPERFAMILY PP2C-like 260 770 IPR036457 -
Lele52g0448 781 Gene3D - 235 776 IPR036457 -
Lele52g0448 781 MobiDBLite consensus disorder prediction 557 571 - -
Lele52g0448 781 ProSiteProfiles PPM-type phosphatase domain profile. 248 769 IPR001932 -
Lele52g0448 781 SMART PP2C_4 248 767 IPR001932 -
Lele52g0448 781 MobiDBLite consensus disorder prediction 557 591 - -
Lele52g0448 781 CDD PP2Cc 485 769 IPR001932 -
Lele52g0448 781 MobiDBLite consensus disorder prediction 1 25 - -
Lele52g0448 781 Pfam Protein phosphatase 2C 603 736 IPR001932 -
Lele52g0448 781 MobiDBLite consensus disorder prediction 63 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0448 Lele-ChrLele52 2647754 2652594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0448 1 781 PP2C-type Phosphatase Gene Family AT2G35350 58.017 0.0 833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0421 49 2443800 2448731 Lele52g0448 52 2647754 2652594 hybridization
Lele50g0451 50 2579851 2584804 Lele52g0448 52 2647754 2652594 hybridization