Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0444 ATGGTCCTGAAGTTTCATGCAGGCTTAGAAATGGCAATGGCTGGGAATGAGAGTGGCAGAATCACTGGGAATTGGAAGAAACGTGTTCATATAGTTGGTGAGAAACTGAAGAGGCTTCCGAGTTTGGCTTGGCAAACCATGTGGAAGGTGGGACGCGAAGACCCCAGAAGGGTGATCCATGCTTTAAAAGTGGGGTTGTCCCTAACCCTTGTTTCTCTGCTGTATCTGGTGGAGCCACTGTTCAAAGGGATTGGAAAGAATGCTATTATAGCTGTAATGACCGTGGTGGTTGTGCTTGAGTTCACAGCAGGGGCAACATTATGCAAAGGTCTGAACAGAGGACTGGGAACCCTTCTGGCAGGATTATTAGCATTGCTTATTCAGTATATTGCAAAATCATCAGGCCATGTCTTTAAAGCTATTTCCATTGGAGCTGCTGTTTTTCTTATAGGAGCTGCTGCTACTTATATGAGGTTCTTTCCCTACATAAAGAAGAACTATGACTACGGTGCAGTGATATTTCTCTTGACCTTTAATCTGATGACTGTGTCGAGCTACCGAGTTGATAATGTATTGGCCATTGTACACGATCGCTTGGTCACCATAGTCATAGGTTGTGGCATTTGCCTTCTCATGAGTCTATTGATATTTCCAAATTGGTCAGGCGAAGACCTTCATAATTCCACGGTTTTCAAGCTTGAAGGCCTAGCCAATTCTATAGAAGTGTGTGTCAATGAATACTTCTATGGTGAAGTGGAAGCAAATGAAGGCATAAAATCGTGTGAGGATCCTATTTACAAAGGTTATAAGGCAGTTCTAGACTCAAAATCTACTGATGAAACACTGGCATTACATGCAAGTTGGGAGCCGAGGCATTCAATGTATTGTCACAGATTTCCATGTAAGCAGTATGTGAAAGTTGGAGCTGTTCTTCGTCAATTTGGGTATACAGTGGTTGCTTTGCATGGTTGTTTAAGAACTGAAATTCAGACACCACGATCTGTTCGAGCCATGTTCAAGGATCCCTGCATACGGCTTGCTGCAGAGGTGTCAAAAGTACTGATAGAACTAGCCAACAGCATAAGGAATCGCCGCCATTGCTCCCCGGAAATACTCTCCGATCATCTTCATGAAGCCTTACAAGACCTCAACGCTGCAATAAAATCTCAGCCTCGTCTCTTCTTGGGATCCAATAATAACCGAGCAAACAACATGTTTGCTATAGCTGCAGCCCAGGCAGGGCAGAAAATGCAGAAACACAGTAATGGAGTTTCACTATCAAGTGTTAAAACCGATTCTTCGGCATTACTGGAATGGAAAACTAAAAGGATTTCTGCTGATCAGTCAAAGGACTCAGAACGAAAGACTCTAAGACCCCAACTAAGTAAAATCGCGATCACTAGCCTTGAGTTCTCTGAAGCTCTTCCTTTTGCTGCTTTTGCTTCATTGTTGGTGGAGACAGTTGCAAAGCTGGACTTTGTCATAGAGGAAGTTGAAGTACTGGGCAGATTAGCTTGCTTCAAAGAGTTCAAACCCGATGATAATGAGGTTGTTGTGACTTGTGAGAAACCCCGTGTTGATGTGACTCAAAACCATTTACCTTCTCATGGTGTTGATTGA 1620 0.4333 MVLKFHAGLEMAMAGNESGRITGNWKKRVHIVGEKLKRLPSLAWQTMWKVGREDPRRVIHALKVGLSLTLVSLLYLVEPLFKGIGKNAIIAVMTVVVVLEFTAGATLCKGLNRGLGTLLAGLLALLIQYIAKSSGHVFKAISIGAAVFLIGAAATYMRFFPYIKKNYDYGAVIFLLTFNLMTVSSYRVDNVLAIVHDRLVTIVIGCGICLLMSLLIFPNWSGEDLHNSTVFKLEGLANSIEVCVNEYFYGEVEANEGIKSCEDPIYKGYKAVLDSKSTDETLALHASWEPRHSMYCHRFPCKQYVKVGAVLRQFGYTVVALHGCLRTEIQTPRSVRAMFKDPCIRLAAEVSKVLIELANSIRNRRHCSPEILSDHLHEALQDLNAAIKSQPRLFLGSNNNRANNMFAIAAAQAGQKMQKHSNGVSLSSVKTDSSALLEWKTKRISADQSKDSERKTLRPQLSKIAITSLEFSEALPFAAFASLLVETVAKLDFVIEEVEVLGRLACFKEFKPDDNEVVVTCEKPRVDVTQNHLPSHGVD 539
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0444 539 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 36 513 - -
Lele52g0444 539 Pfam Aluminium activated malate transporter 48 502 IPR020966 GO:0015743
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele52g0444 Lele-ChrLele52 2627610 2629712 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0444 1 524 Miscellaneous Gene Families AT4G17970 64.121 0.0 685
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0444 52 2627610 2629712 Lele53g0258 53 2144646 2149042 CCT
Lele52g0444 52 2627610 2629712 Lele54g0262 54 2214082 2218513 CCT
Lele52g0444 52 2627610 2629712 Lele56g1174 56 15207853 15208398 CCT
Lele52g0444 52 2627610 2629712 Lele52g0444 52 2627610 2629712 ECH
Lele49g0417 49 2420630 2422786 Lele52g0444 52 2627610 2629712 hybridization
Lele50g0446 50 2560880 2563009 Lele52g0444 52 2627610 2629712 hybridization