Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0430 ATGGCGTGCGAAGTCGATGACTTTCAGGATTTGTCGGGATACGGCGACAGTTACTCACGTTTCAACTCCAAAAGAAGGCGTGATGACTGGTTCCCAGTGGAGAGTCCAGAATCAGTTGCCGAACAAAGACCAACCAAGCAACCCAAGAGCACCAACAACACTAGCAGGACCTCTTGCACCACTTCAACAATGGCTGACCCCATCATCCCTTCAAACCATTCTGCTTCTAATTCCACCTCCCAAATAATCTCTTTTTACAACTCTAATTCTTCCCCAGACGTCGTTTCTCACCAATTTTACAGCTTGGATTCTAGTACTCTTGTCAAGCCTAAAACTGAGCCTATTTTCTCCGCCGACAACTTGGATTTCAGTGCTCCATTCTCCATTTCTCAACCCACCTATGACCACAAACCTCATTCCTTTTTGCTCCCACATGAGAGAAAAACAGCCCCCATTACCAGAAATCCCATCCAAGCTCAAGATCACGTCATGGCCGAAAGAAAACGAAGGGAGAAGCTCAGCCAGAGGTTTATTGCTCTTTCCGCCATTCTTCCTGGCCTCAAAAAGATGGACAAGGCTTCAGTGCTAGGAGATGCTATCAACTATGTGAAACAACTGCAGGAGCGCGTGAAAACTCTGGAGGAACAGGTGAACAAGAAAGAAGTAGAAACCGCGGTGTTAGTGAACAGGTTTGTTCTCTATGCCGACGATGATGGCTCCTCCTCCGATGAAAATTCCAACAGCGGCTCCGACCAGCCGCTTCCCGAAATTGAAGCAAGAGTTTGGGGCAAGGAGGTACTCATCAGAATCCACTGCGACAAACAAAATGGATATTGTGCCACCATACTCTCCCAGTTACAACATCTCAATCTCACTGTCCAGAGTAGCAGCTTCTTGCCCTTCGGGAATACCACTCTTGATGTTACTATTGTTGCTCAGATGAAGAAGGAAGAGTGCGTGACAGCAAAAGATATAGTAAGAAGCTTGAGGAAGGGTCTGAAGCACTTAATTTGA 1014 0.4665 MACEVDDFQDLSGYGDSYSRFNSKRRRDDWFPVESPESVAEQRPTKQPKSTNNTSRTSCTTSTMADPIIPSNHSASNSTSQIISFYNSNSSPDVVSHQFYSLDSSTLVKPKTEPIFSADNLDFSAPFSISQPTYDHKPHSFLLPHERKTAPITRNPIQAQDHVMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAINYVKQLQERVKTLEEQVNKKEVETAVLVNRFVLYADDDGSSSDENSNSGSDQPLPEIEARVWGKEVLIRIHCDKQNGYCATILSQLQHLNLTVQSSSFLPFGNTTLDVTIVAQMKKEECVTAKDIVRSLRKGLKHLI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0430 337 CDD bHLH_AtNAI1_like 159 228 - -
Lele52g0430 337 Coils Coil 196 223 - -
Lele52g0430 337 Pfam Helix-loop-helix DNA-binding domain 160 207 IPR011598 GO:0046983
Lele52g0430 337 MobiDBLite consensus disorder prediction 40 75 - -
Lele52g0430 337 MobiDBLite consensus disorder prediction 20 34 - -
Lele52g0430 337 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 206 IPR011598 GO:0046983
Lele52g0430 337 MobiDBLite consensus disorder prediction 1 75 - -
Lele52g0430 337 Gene3D - 152 222 IPR036638 GO:0046983
Lele52g0430 337 PANTHER BHLH TRANSCRIPTION FACTOR 37 333 - -
Lele52g0430 337 SMART finulus 163 212 IPR011598 GO:0046983
Lele52g0430 337 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 162 228 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0430 Lele-ChrLele52 2535632 2536862 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0430 72 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.264 4.28e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele52g0430 HLH 5.4e-10 No_clan