Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0422 ATGGGTCCCACCTACAGTCAAATGTTGCGGCATAGCGCACGGGATCTCAAGCCTGAGAATCCGTTCCTTGATGAAAACGAGGATCTGAAGGTCTCAAACTTTGGGCGTATCAGCGTTGCCGGAGTGATGCCAATCCGACCCGATGCTCGTGACGCCGTGCGAGCCGCCGGCTTAAGTGGCGTTGAGCCGGAGGTATTGAAGAAGAAAGGGTACGATGGGTCAAAAGCAAATATATGGTCTTGTGGTTGTGGGGTAATCCTCTATGCTCTACTTTCCGGGTATCTTCCATTTCAAGGTGAAAATGTGATGAGCAAAAATGGGTATGGAGTGTATTTATTTGTAGAGAGATGGGTCACTGTGGAAGATGGAGAAGGAGGAGCTGTCAAGAGAAAAAGCAGAGAATATTGGGGGAAGAGGGAGAAATTGTAG 429 0.4872 MGPTYSQMLRHSARDLKPENPFLDENEDLKVSNFGRISVAGVMPIRPDARDAVRAAGLSGVEPEVLKKKGYDGSKANIWSCGCGVILYALLSGYLPFQGENVMSKNGYGVYLFVERWVTVEDGEGGAVKRKSREYWGKREKL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0422 142 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 104 - -
Lele52g0422 142 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0422 142 Pfam Protein kinase domain 14 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0422 142 Gene3D Transferase(Phosphotransferase) domain 1 9 121 - -
Lele52g0422 142 SUPERFAMILY Protein kinase-like (PK-like) 14 104 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0422 Lele-ChrLele52 2492587 2493119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0422 12 104 CBL-interacting serine-threonine protein kinases AT5G10930 55.914 1.21e-24 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele52g0422 Pkinase 1.3e-12 CL0016