Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0410 ATGTCTGTGAAGTGCCCTTCCCGTAATCATTTCAGGAACATTATGGACTTTGATAAAGAGGGCAAAGTCCAGAGAGATGCCAGAAATGAAGTGACTGGAGGGACAGATGGTATCGTGCCCGAGGTATTGGCGGTTCTTGTGAGAAAGATGAAGTCCGTGGAGAATGATGATGCCCATGGTCATGAAAACAACTGGTTGGGTTTCTCTCTCTCCCCCCACATGAATCTAGATGTTCCTTCTGACTGTAATGATCAACACCAACAAGACACACAAGTCACACGGCCTTCCTCCGCCGCCGCAGATGCAGTTCCGGCAAGCTTTTATCCCTCCATGCCCCTTCCTCCTAATTATGGCATTTACTATGATGGTCTTGAAGGTGAAAATGTCGGCTTCTATTCATCCTTTCCCGTTATGCCTCTAAAATCTGACGGCTCTCTCTATCTGATGCAGTCACAACCTCAAGCAATGGTGTCAACTTCAGCCCCAAAACTGGAGAATTTCTTAGGCAGCTCCACAATGGGAACCTTGAGCTTAGACAGCATGATTTTCGCCAACCAATCCTCACGCCGAGAACTCAACAGCTCAAACTATGTAAACCGCGTCGAACAAGGGCAAGACATTCAGGCTCAGCCTTCTGCATCATACTATTCTGGCTTCAGAAGTCATGAAATGATGTTAGAAGTGCCCAAGCAGAATGAGGTTTCAGACTGTAATGTGCAGGTCCATAGTATTGGAGAGGAGGGAGTTTCTGGAATGAAGAGCTGTGGCGTAAGAATGAACCCGGCGGGTCATGTCCCGGAGTCGAAGATGATGGTCAGCGTGGAGGATAACAATGGTGGGGAATCTGGATCCATGGGGTCAATGGCGTATGGCGATTTGCAGTCACTGAGCTTGTCCATGAGTCCTGGTTCACAATCAAGCTGCGTCACAAGTTCACAGAGAGCATCGCCTTCTGTCATTGATTCTGTTGGCGTGGATACAAAGAAAAGAGGGCCTGAAAAGTTTGACCAGAAGCAAATTATTCACCGGAAATCCATAGATACCTTTGGCCAAAGAACTTCCCAATATAGAGGTGTAACAAGACATAGATGGACTGGTAGATATGAAGCTCATCTTTGGGACAACAGTTGCAAGAAAGAGGGTCAAAGCAGGAAAGGAAGGCAAGGGGGTTATGACATGGAAGAAAAAGCTGCGAGAGCTTATGATCTGGCCGCACTCAAGTATTGGGGACCCTCCACTCATATCAATTTCCCGTTGGAGAATTATCAAAATGAACTTGAGGAAATGAAGAACATGACCAGACAGGAATACGTAGCTCATTTGCGGAGGAAAAGCAGCGGATTCTCCAGAGGTGCTTCCATGTACAGAGGAGTAACAAGACATCATCAACATGGGCGATGGCAAGCACGAATCGGTAGAGTTGCTGGAAACAAGGATCTATATCTTGGAACCTTCAGTACCCAAGAGGAAGCAGCTGAGGCATATGACATTGCAGCTATAAAGTTCCGTGGAGTAAATGCGGTGACCAACTTTGATATAACAAGATATGATGTGGACAAAATCATGGCCAGCAGTAACCTTCTTAGCGGTGAACTAGCCAGACGGAACAGAAGGATCGATGGTGGTAACGATCGAGCTATTATTCCTATAGGCACACCATATGTTGAAAACCAGGACGCGATTTCAATGCGCAAGAGCTTGGAGGGCCAATCATCAGAGTGGGAGCTGGGAACGCATATCTTGAATCGTTCTCAATGGATGACAGAACTTGACCAAAATCCACCAAGAATTGAGACTTATAGAACTCATCAGTCCTTCTCAATGCCTTTAGATAACATGATCCATCAAGTAGATGACTCAACAAAGATGGGAACGCACGCCTCAAATCCTTCGTCATTAGTAACAAGCTTGGCCAGCTCACGTGAAGTTAGCCCTGATAAAACTAGCTTGCCAATTCTCACTGAATCGCCTTCGTTAGCGACCAGCTTGAGGCCTCCGCTTTCATTGCCTCATGTGCCAGTTTTTGCTGCATGGACAGATGCTTGA 2046 0.4648 MSVKCPSRNHFRNIMDFDKEGKVQRDARNEVTGGTDGIVPEVLAVLVRKMKSVENDDAHGHENNWLGFSLSPHMNLDVPSDCNDQHQQDTQVTRPSSAAADAVPASFYPSMPLPPNYGIYYDGLEGENVGFYSSFPVMPLKSDGSLYLMQSQPQAMVSTSAPKLENFLGSSTMGTLSLDSMIFANQSSRRELNSSNYVNRVEQGQDIQAQPSASYYSGFRSHEMMLEVPKQNEVSDCNVQVHSIGEEGVSGMKSCGVRMNPAGHVPESKMMVSVEDNNGGESGSMGSMAYGDLQSLSLSMSPGSQSSCVTSSQRASPSVIDSVGVDTKKRGPEKFDQKQIIHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVDKIMASSNLLSGELARRNRRIDGGNDRAIIPIGTPYVENQDAISMRKSLEGQSSEWELGTHILNRSQWMTELDQNPPRIETYRTHQSFSMPLDNMIHQVDDSTKMGTHASNPSSLVTSLASSREVSPDKTSLPILTESPSLATSLRPPLSLPHVPVFAAWTDA 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0410 681 FunFam AP2-like ethylene-responsive transcription factor ANT 354 420 - -
Lele52g0410 681 Pfam AP2 domain 355 410 IPR001471 GO:0003700|GO:0006355
Lele52g0410 681 Pfam AP2 domain 455 504 IPR001471 GO:0003700|GO:0006355
Lele52g0410 681 Gene3D AP2/ERF domain 454 514 IPR036955 GO:0003700|GO:0006355
Lele52g0410 681 Gene3D AP2/ERF domain 354 420 IPR036955 GO:0003700|GO:0006355
Lele52g0410 681 FunFam AP2-like ethylene-responsive transcription factor 453 514 - -
Lele52g0410 681 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 158 537 - -
Lele52g0410 681 PRINTS Ethylene responsive element binding protein signature 356 367 IPR001471 GO:0003700|GO:0006355
Lele52g0410 681 PRINTS Ethylene responsive element binding protein signature 494 514 IPR001471 GO:0003700|GO:0006355
Lele52g0410 681 SUPERFAMILY DNA-binding domain 354 420 IPR016177 GO:0003677
Lele52g0410 681 ProSiteProfiles AP2/ERF domain profile. 355 418 IPR001471 GO:0003700|GO:0006355
Lele52g0410 681 SMART rav1_2 355 424 IPR001471 GO:0003700|GO:0006355
Lele52g0410 681 SMART rav1_2 454 518 IPR001471 GO:0003700|GO:0006355
Lele52g0410 681 CDD AP2 354 418 IPR001471 GO:0003700|GO:0006355
Lele52g0410 681 SUPERFAMILY DNA-binding domain 453 513 IPR016177 GO:0003677
Lele52g0410 681 MobiDBLite consensus disorder prediction 620 651 - -
Lele52g0410 681 CDD AP2 453 514 IPR001471 GO:0003700|GO:0006355
Lele52g0410 681 ProSiteProfiles AP2/ERF domain profile. 454 512 IPR001471 GO:0003700|GO:0006355
Lele52g0410 681 Coils Coil 419 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0410 Lele-ChrLele52 2392294 2397439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0410 50 681 AP2-EREBP Transcription Factor Family AT4G37750 43.182 1.84e-141 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele52g0410 AP2 4.5e-10 CL0081