Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0406 ATGTTGTCCACTCTCTCACCTTCCCACCCTTTCCTCGGGAACCCCTTCTCCGCCTTTGACGGCGGCCTCACGCCGTGGGAGTTCCCGGACCTTTCCTCTGTCTTGGATCCCATCGACCCCATCACTAATTCAAGTTCCGGCTCTGACGAACCGGATCAAATCCATGCCAAGAGAAAATCCCCCGGCTCGGATGACCAAACGGACCGTCCGGATTCCGTCATGGAGGACCGAAAGCGGAGACGGATGATATCGAACCGGGAGTCGGCGAGACGCTCGCGTATGCGTAAACAGAGGCATCTAGAGAACTTACGGAACCAGCTGAACCGGTTTAGGATGGAAAACCGAGACCTGAACAACCGGATGCAGCTCTTGCTTCACCTCACTAGCCGCGTACGAACCGAAAACGAATGGCTCCGGTGCGAGGGTACCATGCTCCGGCAAAAGCTGTCGACCCTAACGCCATATTTGGTTTTCCAACAACTGCAACCCGTCTCATCTGCATGGCCATGCAACACTAGCGTCACAGACAGAATAAAGCTTGACCGTCTGGATCGTTACCCTGTTCTTAAAATTAGGAACTCGATCGAAATTCCACCGCAGACTCTGATCTTTCGTTCCGTACTGAGTGTTGTGTTGTGCATATCGCTCAGCGTCACCCAAGTCTTAAACCGGAACGCTCATGAGGCATGA 690 0.5362 MLSTLSPSHPFLGNPFSAFDGGLTPWEFPDLSSVLDPIDPITNSSSGSDEPDQIHAKRKSPGSDDQTDRPDSVMEDRKRRRMISNRESARRSRMRKQRHLENLRNQLNRFRMENRDLNNRMQLLLHLTSRVRTENEWLRCEGTMLRQKLSTLTPYLVFQQLQPVSSAWPCNTSVTDRIKLDRLDRYPVLKIRNSIEIPPQTLIFRSVLSVVLCISLSVTQVLNRNAHEA 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0406 229 FunFam BZIP transcription factor 75 126 - -
Lele52g0406 229 SUPERFAMILY Leucine zipper domain 77 126 IPR046347 GO:0003700|GO:0006355
Lele52g0406 229 PANTHER BZIP TRANSCRIPTION FACTOR 44 37 159 - -
Lele52g0406 229 Gene3D - 76 130 - -
Lele52g0406 229 MobiDBLite consensus disorder prediction 51 90 - -
Lele52g0406 229 MobiDBLite consensus disorder prediction 34 96 - -
Lele52g0406 229 SMART brlzneu 73 137 IPR004827 GO:0003700|GO:0006355
Lele52g0406 229 CDD bZIP_plant_GBF1 78 129 IPR045314 GO:0003700|GO:0006355
Lele52g0406 229 Pfam bZIP transcription factor 75 135 IPR004827 GO:0003700|GO:0006355
Lele52g0406 229 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 80 95 IPR004827 GO:0003700|GO:0006355
Lele52g0406 229 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 75 138 IPR004827 GO:0003700|GO:0006355
Lele52g0406 229 Coils Coil 86 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0406 Lele-ChrLele52 2375212 2376199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0406 1 162 bZIP Transcription Factor Family AT2G22850 35.349 2.33e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele52g0406 bZIP_1 1.2e-07 CL0018