Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0393 ATGGCTAGCTGTAGTTCAAGTTCTAAGCCACCGGTGTGGCCGAGAAGCCAAAGAGAAAGCTGGCTTTCCGGCCGCCTTAGATTTCAGGCCTTCAATGGTGGGGCCAGAGCAAAATCTTGTGGTTGTATGTGGAGGTCGGAGAGCAGAAAAAGGGCAGCGCCAGAATTTGTAGTGAGAGGAAGCGGCGAGTGGGACCAAATCAGAGGAGACGGCTACGGCACTGCCGACGAAGACCAAGTGTTTGTCAACGTCCTGCGAGAGGCTCAGCCCTATATCTCTATTCACAGAGACAGCATCTTCGTCCTCGTCATTTCTGCTGAAATTATTGCCAGCCCTCACCTGGACGCCATTCTAAAGCTAATGTTCCCATCCCTGCATCGTGACATTTCGTTTACTCTTGATAGCTTCTCAATGGCGGCTTCAATATCGAGCTCTGGCATTTCTCTTCACCCTCCTCCCACATTTTCAGATTTCCTCTTACGTCCTGACCTGTGCTATTCTTCTCACAATTTCTACTCGCAACTGAATGTAAAATTTCGTTCCCTAAAACCCTTAGCTGTAGCCGCCGATGCCAGAGCAAAGCTCAATAAGGGAACCTCAATCAAATGCAATGTGTTCAGCGAAGAATTGGGAGAGAGCGCCGAAGACGAGAGCTATGGTACAGAGAAAGACAAGCAATTTGTGCTCTGGTTTCGTGAGGCCTGGCCTTACTTACGGGCCCATAGGGGCGGCACCTTCGTCGTGATTATTTCCGGTGAAATTGTGGCTAGTCCTTTCTTAGATCTCATTCTTAAGGATATAGCTTTACTTCATCAGCTGGGAATTCGGTTTGTTCTTGTACCGGGGACCCATGTGCAAATAGACAAGCTTTTGGCTGAGAGAGGGAGCAAAGCTAAGTATGATGGTCGGTATAGGGTTACTGATGATGAATCTCTTTCTGCTGCCATGGAAGCAGCTGGCGGAATCAGGTTGATGATAGAAGCAAAACTTTCTCCTGGACCATCCAAATGCAATATTCGTCGACATGGTGACAATAGTCGCTGGCATGAAGTTGGAGTCAGTGTTGCTAGTGGTAACTTTCTCGCGGCCAAGAGAAGAGGGGTTGTTAATGGAATTGACTATGGGTCAACTGGAGAAGTTAAGAAAGTAGACGTTTCTCGCATGCGTGAGAGGCTTGATGGTGGATGTATAGTTCTTCTAAGTAACCTTGGATATTCCAGCTCCGGAGAAGTATTAAATTGCAACACCTATGAAGTCGCAACGGCTTGTGCATTAGCTATTGGAGCAGACAAGCTTATTTGCATCATAGATGGTCCAATACTTGATGAGAATGGACGCCTTATTCGTTACTTGCCTCTTCAAGAAGCAGATTTATTAATTCGTAAACGGGCTGAGCAAAGTGAAATAGCTGCTAACTATGTCAAAGCTGTTGATGATGATAATTTCAGCTCTCTTGGTTGTAAAAGTTCTAATGGAACAGCCCATTCCCCGCAGAATGGATATACTTATGCCAGAACCCATAATGCAACCTTTCTTAATGGTGTTGGTTTCGACAATGGGAATGGCCTATGGTCTGGTGAACAAGGCTTTGCTATTGGAGGTCAAGAGCGGCTAAGTCGAATGAATGGTTACCTGTCAGAATTGGCTGCAGCAGCTTTTGTTTGCAGAGGAGGTGTGCAAAGAGTTCACTTACTGGATGGAACTATTAGTGGAGTCTTGCTGTTTGAATTGTTTAAGAGAGATGGGATGGGAACAATGGTGGCCAGTGATCCGTATGAAGGAACTCGGACGGCTCAGGTTGCAGATGTTCCTGCAATAAAACAACTTATTCAGCCTTTGGAGGCATCTGGTGTATTGGTTAAGAGGACTGATGAGGAGTTGCATCAATCAGTGGATTCATTCGTTGTTGTGGAAAGGGAGGGTCAAATGATTGGTTGCGCTGCACTTTTTCCTTTCTTTGAGGAGAAGTGTGGAGAGGTTGCCGCCATTGTAGTATCGCCAGACTGTCGTGGCCAAGGACAGGGTGACAAATTGCTTGACTATATTGAGAAGAAGGCTTCGTCTCTTCGGTTGAACATGCTTTTCCTGCTTACGACTCGGACAGCAGATTGGTTTGTGAGTCGCGGATTTTCAGAATGTTCAATTGATTATATACCGGAGAAGAGAAGGGGCAGAATTGATCTGTCGCGTAATTCCAAGTATTATATGAAGAGGCTTCAACTCGACAGAAGTGGAATTATAGTTGGTAGAAAATTTGTACAGGATTAG 2268 0.4586 MASCSSSSKPPVWPRSQRESWLSGRLRFQAFNGGARAKSCGCMWRSESRKRAAPEFVVRGSGEWDQIRGDGYGTADEDQVFVNVLREAQPYISIHRDSIFVLVISAEIIASPHLDAILKLMFPSLHRDISFTLDSFSMAASISSSGISLHPPPTFSDFLLRPDLCYSSHNFYSQLNVKFRSLKPLAVAADARAKLNKGTSIKCNVFSEELGESAEDESYGTEKDKQFVLWFREAWPYLRAHRGGTFVVIISGEIVASPFLDLILKDIALLHQLGIRFVLVPGTHVQIDKLLAERGSKAKYDGRYRVTDDESLSAAMEAAGGIRLMIEAKLSPGPSKCNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDYGSTGEVKKVDVSRMRERLDGGCIVLLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDENGRLIRYLPLQEADLLIRKRAEQSEIAANYVKAVDDDNFSSLGCKSSNGTAHSPQNGYTYARTHNATFLNGVGFDNGNGLWSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLFELFKRDGMGTMVASDPYEGTRTAQVADVPAIKQLIQPLEASGVLVKRTDEELHQSVDSFVVVEREGQMIGCAALFPFFEEKCGEVAAIVVSPDCRGQGQGDKLLDYIEKKASSLRLNMLFLLTTRTADWFVSRGFSECSIDYIPEKRRGRIDLSRNSKYYMKRLQLDRSGIIVGRKFVQD 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0393 755 SUPERFAMILY Carbamate kinase-like 541 592 IPR036393 -
Lele52g0393 755 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 593 741 IPR000182 GO:0016747
Lele52g0393 755 Pfam Amino acid kinase family 246 457 IPR001048 -
Lele52g0393 755 Pfam Acetyltransferase (GNAT) family 628 696 IPR000182 GO:0016747
Lele52g0393 755 Gene3D - 225 591 IPR036393 -
Lele52g0393 755 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 596 739 IPR016181 -
Lele52g0393 755 CDD NAT_SF 634 696 - -
Lele52g0393 755 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 227 476 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lele52g0393 755 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 548 739 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lele52g0393 755 Hamap Amino-acid acetyltransferase [argA]. 226 739 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lele52g0393 755 Gene3D - 592 739 - -
Lele52g0393 755 PANTHER AMINO-ACID ACETYLTRANSFERASE 209 746 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lele52g0393 755 CDD AAK_NAGS-ABP 226 587 IPR033719 -
Lele52g0393 755 SUPERFAMILY Carbamate kinase-like 226 461 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0393 Lele-ChrLele52 2303531 2310069 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele52g0393 AA_kinase 2.7e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0364 49 2143618 2150588 Lele52g0393 52 2303531 2310069 hybridization
Lele50g0397 50 2216650 2223229 Lele52g0393 52 2303531 2310069 hybridization