Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0389 ATGGATACGTTGTTTAGGGTCGTCAATTTTCAACATCAACCTCAACCTGATCAATCTCTCAACTCCACCACCAGCCTCACTTCTAGCAGCTCCAGATCTTCCAGACAAAACTGCAACCCCCCACCTCAAGACGAAGAATGCTTCAACCTTTTCATGGATGAAGAAGACTTGTCCTCTTCTTCTTCTAAGCACTACTATCCCTGTCTCCCGGCCCATCCTTCCTCCACTACCACCCCCACTACCACCCCCACTACCACGGCTGATTTCTCCTTCTCACCCTCCGCTGACTTCAACTTGGAATTATCGTCCGGTAACGGCAAGTGGGCTTCCGATATCCTCCTCGAAACAGCTCGTGCCATTGCTGATATGAACAGCTCTCGTATCCAGCAACTCATGTGGATGCTCAACGAACTCGCCTCCCCTTACGGCGACACTCATCAGAAACTTGCGTCTTACTTTGTCCAAGCCTTGTTCGCCCGCATGACCAATTCTGGCCTTCGCACCTACCGTTCCTTAACCACCGCATCGGACAAAAACTGTTCTTTTGAATCGACAAGGAAGACCGTCTTGAAGTTCCAGGAGGTCAGCCCTTGGACTACCTTCGGTCACGTCGCTTCCAATGGCGCCATCTTGGAAGCCCTTGAAACTGAGCCTAAATTACATATACTCGATTTCAGCAACACGTATTGCACCCAATGGCCTACCCTTTTAGAGTCCTTGGCCACTCGCACTGACGATGCCCCGTATCTCCGTTTAACCACCGTCGTCACCAGCCGACCTGGTGGTTCCGATGCGGCAGTTCAAAAAGTCATGAAGGAAATAGGTGCTAGGATGGAGAAATTCGCGCGTCTCATGGGTGTACCCTTCAAATTCAACGTCATCCATCATACCGGTGATCTTTCAGAGTTGAACTTTGTGGAATTAGATATTAAAGATGACGAGGCTTTAGCTATAAACTGTGTGAACGCTTTGCATTCTGTCTCAGTTGTGGGTAATGGTAATCATCGTGACGCGTTGATATCCTCGTTTCGGAGATTACAACCTAGAATAGTTACGATAGTGGAAGAGGAAGCTGATCTTGATTTTGGGTATGACGGTTTTGAGTTTTTGAACGGGTTTGAAGAATGCTTGAGGTGGTTTAGGGTTTATTTTGAGGCGTTGGAGGAGAGCTTCCCGAAGACGAGCAACGAAAGGCTCATTCTTGAGAGGGAGGCAGGACGAGCGATGGTTGACTTGGTGGCTTGTGATCCGTCGGAGTCGGTGGAGCGGCGGGAAAGGGCGGGACGGTGGTCGCAGCGTATGCATGGGGCTGGGTTCAATGCGGCGTCGTTTAGCGACGAGGTATGTGACGATGGGAGAGCGCTGTTGAGAAGGTACAAGGAGGGGTGGTCAATGACACAGTGCTCCCATGCCGGAATATTCTTGTCGTGGAAGGATCAGCCGGTGGTGTGGGCCAGTGCATGGAGGCCATGA 1473 0.5058 MDTLFRVVNFQHQPQPDQSLNSTTSLTSSSSRSSRQNCNPPPQDEECFNLFMDEEDLSSSSSKHYYPCLPAHPSSTTTPTTTPTTTADFSFSPSADFNLELSSGNGKWASDILLETARAIADMNSSRIQQLMWMLNELASPYGDTHQKLASYFVQALFARMTNSGLRTYRSLTTASDKNCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALETEPKLHILDFSNTYCTQWPTLLESLATRTDDAPYLRLTTVVTSRPGGSDAAVQKVMKEIGARMEKFARLMGVPFKFNVIHHTGDLSELNFVELDIKDDEALAINCVNALHSVSVVGNGNHRDALISSFRRLQPRIVTIVEEEADLDFGYDGFEFLNGFEECLRWFRVYFEALEESFPKTSNERLILEREAGRAMVDLVACDPSESVERRERAGRWSQRMHGAGFNAASFSDEVCDDGRALLRRYKEGWSMTQCSHAGIFLSWKDQPVVWASAWRP 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0389 490 MobiDBLite consensus disorder prediction 11 45 - -
Lele52g0389 490 Pfam GRAS domain family 111 489 IPR005202 -
Lele52g0389 490 MobiDBLite consensus disorder prediction 11 43 - -
Lele52g0389 490 ProSiteProfiles GRAS family profile. 100 489 IPR005202 -
Lele52g0389 490 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 109 482 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0389 Lele-ChrLele52 2277843 2279315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0389 1 490 GRAS Transcription Factor Family AT4G37650 60.111 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele52g0389 GRAS 2e-105 CL0063