Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0388 ATGGCTAATAGTGGTCCGCACACCAATGGCTCCCAGTGTTTCATCCTGTACAAATCTGCTGTCCATCTAAACTATAAACACACAGTTTTTGGCGGAGCGGTAGGTGGCTTGACAACGTTGGCAGCCATGGAAAAGGCTCATGTTGATGGCAATGACCGACCTCTGGATAAGGTTGGGTCATGGTATAGTAATCCTGGTGCCGGAACATCTGAATCTGGAGGCGTGGGTGTTGGCGGTGTTGGCAAGTACTTGAAAGCCAGGAATGCTCAAGATTCCGCTACTGTTGACAATAGCACATCAGTTTTAGGAAAGAAAAGAAAAGTGGGAGTTGCCAGTGAAGAATTTTCTGCATGGGGGGGGGGGGGTGGAGAAAACACAACAGTGGGAGCATTTTTACACTCCTCGTGTTCTGATAGGATGTGTACATTAAGTGTATTCAGTGAGAGAGTATATTGGTTACAACTTGCAAAAACAAGCGTTTGGTCCCCAGCACAAGTTTCAATCATGCTCTGTTGCTGCTATGTCAGAATTATACAGCGTGCTCCCGGGTATAATTGGCTTCATTCAAACCTGCATCTATCCACAAGCCTTTCTGGAGTACATGCGCCATGGACCCTAATAACTGGTGTCACTTTGTTTGAGATTGATGGCTTAGAAGGAGAATGGAATACCCTGAAGGCATACCTCAGGACAGAGGACGGCAAGAAGGTCAAATATCTGAACTGTTCCTATAGCTGA 738 0.4621 MANSGPHTNGSQCFILYKSAVHLNYKHTVFGGAVGGLTTLAAMEKAHVDGNDRPLDKVGSWYSNPGAGTSESGGVGVGGVGKYLKARNAQDSATVDNSTSVLGKKRKVGVASEEFSAWGGGGGENTTVGAFLHSSCSDRMCTLSVFSERVYWLQLAKTSVWSPAQVSIMLCCCYVRIIQRAPGYNWLHSNLHLSTSLSGVHAPWTLITGVTLFEIDGLEGEWNTLKAYLRTEDGKKVKYLNCSYS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0388 245 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 57 IPR002130 GO:0000413|GO:0003755
Lele52g0388 245 Gene3D - 1 61 IPR029000 -
Lele52g0388 245 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 1 58 IPR044666 -
Lele52g0388 245 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 58 IPR002130 GO:0000413|GO:0003755
Lele52g0388 245 SUPERFAMILY Cyclophilin-like 1 58 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0388 Lele-ChrLele52 2274351 2276707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0388 1 118 U-box Gene Family AT5G67530 46.061 4.74e-28 110