Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0387 ATGGAAGAAGCGCCTGCTGCTAAAGCCTCATCAAGTGATAAAACTGCTGCTAGGATAGCTATGCACTTGTCTGGTGAGAGGGCTCCAGTAAATGGGAAGCTGGTGAGTTTCACAGATTTGATCTTTGCTTGGATTAGTATAATATGTACTTCGAGTTTTTGTGCATTAATGGAGAAAAATCCGAAGAAGAAAGGATATGTACAATTGCATACAACTCATGGTGATTTGAACATTGAGCTGCACTGTGATATATCACCCAGGGCACGTGAGAACTTTATCACACTTTGTGAGCGTGGATATTATAATGGGGTTGCATTTCATAGGAATATACGGAATTTTATGGTACAAGGTGGTGATCCTACTGGGACTTGA 372 0.4086 MEEAPAAKASSSDKTAARIAMHLSGERAPVNGKLVSFTDLIFAWISIICTSSFCALMEKNPKKKGYVQLHTTHGDLNIELHCDISPRARENFITLCERGYYNGVAFHRNIRNFMVQGGDPTGT 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0387 123 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 80 95 IPR002130 GO:0000413|GO:0003755
Lele52g0387 123 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 106 118 IPR002130 GO:0000413|GO:0003755
Lele52g0387 123 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 70 123 IPR002130 GO:0000413|GO:0003755
Lele52g0387 123 SUPERFAMILY Cyclophilin-like 54 123 IPR029000 -
Lele52g0387 123 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 61 123 IPR044666 -
Lele52g0387 123 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 66 123 IPR002130 GO:0000413|GO:0003755
Lele52g0387 123 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 101 118 IPR020892 GO:0003755|GO:0006457
Lele52g0387 123 Gene3D - 50 123 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0387 Lele-ChrLele52 2273495 2274267 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0387 4 123 U-box Gene Family AT5G67530 67.424 3.37e-54 176