Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0383 ATGAATTATGCGAACTCATCGTTTCTATATGTAGCGGATGAAGAAGGGTCTTTAAGGCTACAATACCAGGAGGGAAAACTAGAACGCAAAGAAGATAAGAGCAAGGCAAACGATTACTGTCAAGCGATGGATCCTTTTTCATTAGATGAACGCTTTACAAAGGTGCGATCTAAGAACACGTCAAGAGAAGCTCTTGAAAAATGGAGGAACCTATGCGGGGTAGTCAAGAACCCCAAACGACGCTTTCGTTTCACAGCCAATCTCCCCAAGAGAGACGAAGCGGCTGCTATGCGTCGTACCAACCAGGAGAAGCTGAGGGTTGCTGTTCTAGTTTCCAAAGCGGCACTCCAATTTATTCAAGGTGTGCCACAAAGTGATTATGTTGTACCCGAACATGTTAAAGCAGAAGGTTTTCAGATCTGCGCCGAAGAATTGGGGTCTATTGTTGAAGGTCATGATTTAAAGAAGCTGAAATATCATGGCGGGGTTAATGGTCTTGCTGGAAAGCTTTCAGTATCAATGAACGATGGGCTTAGCAATGACACTGATCTTCTTAACAAGAGACAAAAGGTTTATGGAATCAACAAATTTACCGAGGCTGAGACTCGGAGTTTCTGGGTTTTTGTTTGGGAAGCCCTTCAAGACATGACTCTCATGATCCTCGGAGTATGTGCTCTTGTGTCTCTCATAGTTGGCATAGCAATGGAAGGATGGCCCCATGGGGCCCATGATGGTCTTGGAATTGTTGCAAGTATCTTACTGGTTGTATTTGTGACAGCAACAAGTGATTACCGCCAATCATTACAATTCAAGGACTTGGACAAAGAGAAGAAGAAGATTACCATTCAGGTCACAAGAAATGGTTATAGGCAGAAAATGTCAATATATGATTTACTTCCCGGTGACATTGTGCATCTTGCTATAGGAGACCAAGTCCCAGCAGATGGCCTATTTCTTTCAGGATTTTCTGTGTTGATCGATGAGTCAAGTTTAACTGGAGAGAGTGAACCAGTGATGGTGAGTTCTGAAAATCCATTTCTTCTTTCAGGTACTAAGATCAAAGATGGCTCTTGCAAAATGATGGTTACCACTGTTGGGATGAGGACTCAATGGGGTAAGTTGATGGAAACTCTCAGTGAAGGAGGAGATGATGAAACCCCATTGCAGGTAAAGTTAAATGGAGTGGCAACCATTATCGGGAAGATAGGCCTGTTCTTTGCCATAATTACTTTTGCAGTTTTAGTGCAAGGCCTTTTGAACCGTAAGTTCCAAGAAGGAAGCCTCTTGACCTGGTCTGGAGATGATGCGTTGCACACTTTGGAATTCTTTGCTGTGGCAGTTACTATCGTTGTTGTTGCTGTTCCCGAGGGGCTGCCTTTAGCTGTTACATTGAGCCTTGCTTTTGCTATGAAGAAGATGATGAATGACAAAGCCCTTGTCCGAAACTTAGCAGCTTGTGAAACCATGGGATCAGCCACAACAATATGTAGTGACAAGACTGGAACATTAACTACCAACCGTATGACAGTTGTGAAAACATGCTTTTGTATGAATAGGAAGGAAGTGAGCAATGATGCTTCTTCTACCTTACCTACTGATCTCCCTGATTCTGCTGCGAAACTAATGCTACAGGCAATATTTCTTAACACTGGAGGAGAAGTTGTGGTCAACGAAAATGGAAAACGCGAGGTTTTGGGAACACCAACAGATGCTGCGATATTGGAGTATGGGTTATCTCTTGGTGGGGACTTTCAGGCAGAGAGAAATGCATGCAAGCTTGTTAAAGTTGAACCATTTAACTCTGTAAAGAAAAGGATGGGTGTGGTTGTGGAGCTTTCTAAGGATGCAGGCTTTAGAGTCCACACTAAAGGAGCTTCTGAAATAATTCTGGCTGCTTGTGACAAGGTTATCGATTCCAAAGGTAAGGTTGTTCCACTTGATAAAGAATCTAGGAACCATCTTACGGTGACAATAAACCAATTTGCAAGTGAGGCACTTAGAACTCTATGCATCGCCTACATGGACATGAAAAAGGGATTCTCAGCTGAAGACCCCATTCCAGTTTCTGGGTATACTTGTATTGGAATTGTTGGTATCAAGGATCCTGTTCGTCCTGGGGTTAAAGAATCGGTTGCAGTTTGTCGTTCAGCTGGTATAACAGTAAGGATGGTTACGGGTGACAATATTGATACTGCAAAGGCTATAGCTAGAGAATGTGGGATTTTAACAGATGATGGTATAGCCATTGAAGGTCCAGAATTTAGAGAGAAGAGTCAAGAGGAACTGTTGAAACTGATCCCAAAAATTCAGGTTATGGCTCGTTCTTCACCTATGGACAAGCATACATTGGTGAAACACCTCCGTACCACATTCAGGGAAGTCGTAGCTGTGACTGGTGATGGAACAAATGATGCCCCAGCCCTTCATGAAGCTGACATTGGACTTGCTATGGGCATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCAGATGTCATCATTCTGGATGATAACTTTTCCACAATCGTGACAGTGGCGAAATGGGGACGTTCAGTTTACATAAACATTCAGAAATTTGTACAGTTCCAGCTGACTGTTAATGTGGTTGCGTTACTAGTGAACTTCACTTCAGCTTGCTGGACAGGTAGTGCACCTCTGACAGCTGTACAACTACTGTGGGTGAACATGATAATGGACACACTGGGAGCACTGGCACTGGCAACTGAACCTCCAAATGATGAATTGATGAAGCGGTCACCGGTAGGAAGGACCGGTAATTTCATTAGCAAGATCATGTGGAGGAACATCTTAGGACAATCATTGTATCAGATTATGGTGATATGGTTTCTTCAGACCAGTGGAAAATTGTATTTTAACCTCAATGGCCCTGATGCTGATCTGATCCTAAACACACTAATTTTCAACGCATTCGTCTTCTGTCAGGTTTTTAATGAAATAAGCTCACGTGAGATGGAGAAAATAAATGTTTTCAAAGGCATATTGAATAATTGTGTTTTCGTAGGCGTCATCTGTTGCACTGTTATCTTTCAAATCATAATCGTTGAGTTCTTGGGAACCTTTGCAAACACCACCCCTCTCACTCTGCAGCAGTGGGTCTCAAGCATATTCATCGGACTTCTGGGCATGCCAATTGCAGCTGTCATAAAGATGATCTCTGTCTGA 3180 0.4292 MNYANSSFLYVADEEGSLRLQYQEGKLERKEDKSKANDYCQAMDPFSLDERFTKVRSKNTSREALEKWRNLCGVVKNPKRRFRFTANLPKRDEAAAMRRTNQEKLRVAVLVSKAALQFIQGVPQSDYVVPEHVKAEGFQICAEELGSIVEGHDLKKLKYHGGVNGLAGKLSVSMNDGLSNDTDLLNKRQKVYGINKFTEAETRSFWVFVWEALQDMTLMILGVCALVSLIVGIAMEGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITIQVTRNGYRQKMSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVLIDESSLTGESEPVMVSSENPFLLSGTKIKDGSCKMMVTTVGMRTQWGKLMETLSEGGDDETPLQVKLNGVATIIGKIGLFFAIITFAVLVQGLLNRKFQEGSLLTWSGDDALHTLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNRMTVVKTCFCMNRKEVSNDASSTLPTDLPDSAAKLMLQAIFLNTGGEVVVNENGKREVLGTPTDAAILEYGLSLGGDFQAERNACKLVKVEPFNSVKKRMGVVVELSKDAGFRVHTKGASEIILAACDKVIDSKGKVVPLDKESRNHLTVTINQFASEALRTLCIAYMDMKKGFSAEDPIPVSGYTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNIDTAKAIARECGILTDDGIAIEGPEFREKSQEELLKLIPKIQVMARSSPMDKHTLVKHLRTTFREVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFTSACWTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRTGNFISKIMWRNILGQSLYQIMVIWFLQTSGKLYFNLNGPDADLILNTLIFNAFVFCQVFNEISSREMEKINVFKGILNNCVFVGVICCTVIFQIIIVEFLGTFANTTPLTLQQWVSSIFIGLLGMPIAAVIKMISV 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0383 1059 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 248 526 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele52g0383 1059 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 768 879 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele52g0383 1059 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 590 743 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele52g0383 1059 Pfam Ca2+-ATPase N terminal autoinhibitory domain 48 93 IPR024750 GO:0005516
Lele52g0383 1059 Gene3D - 184 379 - -
Lele52g0383 1059 Pfam E1-E2 ATPase 279 474 - -
Lele52g0383 1059 FunFam Calcium-transporting ATPase 259 379 - -
Lele52g0383 1059 Gene3D - 211 1057 - -
Lele52g0383 1059 Gene3D - 60 120 - -
Lele52g0383 1059 Gene3D - 493 843 IPR023214 -
Lele52g0383 1059 PRINTS P-type cation-transporting ATPase superfamily signature 496 510 - -
Lele52g0383 1059 PRINTS P-type cation-transporting ATPase superfamily signature 822 834 - -
Lele52g0383 1059 PRINTS P-type cation-transporting ATPase superfamily signature 695 706 - -
Lele52g0383 1059 PRINTS P-type cation-transporting ATPase superfamily signature 717 727 - -
Lele52g0383 1059 PRINTS P-type cation-transporting ATPase superfamily signature 798 817 - -
Lele52g0383 1059 PRINTS P-type cation-transporting ATPase superfamily signature 327 341 - -
Lele52g0383 1059 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 154 1058 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele52g0383 1059 SFLD p-type atpase 478 850 IPR044492 -
Lele52g0383 1059 PRINTS H+-transporting ATPase (proton pump) signature 654 672 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele52g0383 1059 PRINTS H+-transporting ATPase (proton pump) signature 830 855 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele52g0383 1059 PRINTS H+-transporting ATPase (proton pump) signature 798 814 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele52g0383 1059 SUPERFAMILY HAD-like 494 903 IPR036412 -
Lele52g0383 1059 Pfam Cation transport ATPase (P-type) 557 636 - -
Lele52g0383 1059 PANTHER CATION TRANSPORTING ATPASE 102 1058 - -
Lele52g0383 1059 Pfam Cation transporting ATPase, C-terminus 883 1057 IPR006068 -
Lele52g0383 1059 FunFam Calcium-transporting ATPase 691 843 - -
Lele52g0383 1059 Pfam Cation transporter/ATPase, N-terminus 159 228 IPR004014 -
Lele52g0383 1059 CDD P-type_ATPase_Ca_PMCA-like 185 931 - -
Lele52g0383 1059 FunFam Calcium-transporting ATPase 506 702 - -
Lele52g0383 1059 SFLD C1.7: P-type atpase like 478 850 - -
Lele52g0383 1059 FunFam Calcium-transporting ATPase 60 120 - -
Lele52g0383 1059 Gene3D - 506 702 IPR023299 GO:0000166
Lele52g0383 1059 FunFam Calcium-transporting ATPase 815 1059 - -
Lele52g0383 1059 SUPERFAMILY Calcium ATPase, transduction domain A 281 377 IPR008250 -
Lele52g0383 1059 ProSitePatterns E1-E2 ATPases phosphorylation site. 498 504 IPR018303 -
Lele52g0383 1059 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 707 IPR023299 GO:0000166
Lele52g0383 1059 SUPERFAMILY Calcium ATPase, transmembrane domain M 159 1057 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0383 Lele-ChrLele52 2252866 2258320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0383 48 1059 Primary Pumps ATPases AT4G37640 80.534 0.0 1667