Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0380 ATGAAAGCTCATCATTTGAGCTTCTTTTTTATCATATTATTGTCTCCATCCCTCGTCATCGCCACTGCAAAAGGGGTCAATACCACCCAATTCCGCACTGTCAATGAATCTCAGCCAAGAAGAATTCTGCACCAACCATTGTTTCCGGCGAATTCTGCACCACCGCCAGGCACCGACTCGCCTCCACCACCGCCACCTTACACTACTCCACCTTCTCCCGACACCAGCATTCCCTTCTTTCATGAGGATCCTGCGGGGCCACCTCCAAATCAGAACCAGCCACCACCTTCGATTCCCAATGCCACAATTGCGAACCCGACAGCAACACAACCGACCAAGCCAACAAAGAAGGTCGCAATTGCAATCTCTGTCGGAATTGTCACGCTTGGCATGCTCTCGGCTCTTGCCTTCTTCTTGTACAGGCATCGGGTGAGGCAACCCATCGAGACTCAGAAGCTCGTCGGTGGCAATTCTCAGAGGATTCCTGACGATCCAAGGGTGCCACCATCGAGCTTTCTCTACATTGGGACCGTGGAACCAAGACGAACGTCCGTGACCGACGCGAGTGAGACCAATGGGGCAAACAGGTCTCCTTATCACAAGCTCAATTCTATTAATCGATCCGAAAGATACCGTCCCAGTCCTGAATTGCAGCCATTGCCGGCGTTGAGTAAGCCTCCAGATGGGAATTATCCACCGGTGGCGTCTTCATCATCCTCCGACGACGAGGAAAGCCACGAGACCGTGTTTCATTCCCCACAGGGGTCATCATTGAGTTACGAGGATAGCTATTACACCCCAGTTTCGCGTCATAGTTCTCTGGCTAATGGTGGAAAGTCGGCTTCTCTCAGGAGTCAGACATATTCCGCTACTTCAATCCCCCATTCAAAGAGAACTTCACCGAAATCTCGGCTTGCGGCTTCATCGCCGGATATTAGGCAAGTCATTATACCACCAATTAAGCAGGATCCGCCTGTGACGGCACCTGCTCCACCCCCGCCGGCACCACCACTTTCACACCCGTATCAGCATCAGGGCAAAGAAGTGACTAACGGTCATTCCAGGAGACCGAAATTCTCAGCGCCTCCGCCAGCGCCTAATTTGACGTGTCTTCAGTCAACTAACACCACACCCCAAAACATATCTAGAAATTCCCTCCATCCTCCTCCTCCTCCCCCACCGCCTCCGCCCCCACCACGGCAATTGACGCCGCGGAAAGCAGGGTCTCCAGCAACCGGCGTTTCCTCATCCTCTGCAACAACGCACCGACAATCTTGCTCTCCAAACCAAGGAGCCGGTTCTGCGAATAGCGTAACAAAATCTTCAGAAAATGGTGATAAAAGTCACAGCTCTTCTGGGAGGCTTGAAGCCGATGACACGGAAGGAGCAAAACCCAAGTTAAAGGCTCTGCATTGGGATAAAGTACGCGCGACTTCAGACCGCGCTACAGTGTGGGACCAACTAAAATCAAGCTCATTTCAATTAAACGAGGACATGATGGAATCCTTGTTTGGCTGCAATTCCGTGAAACCCGCCCCTAAAGAGCCCATACGAAGATCAGTTCTTCCACCTGTTGAACAGGAGAACAGAGTATTAGACCCAAAGAAGTCTCAAAACATAGCTATACTTCTAAGGGCACTGAATGTGACAAGAGATGAGGTGTCTGACGCCCTTCTAGATGGGAATCCTGAAGCGTTGGGTGCAGAACTTTTGGAAACTTTAGTAAAAATGGCTCCCACTAAGGAGGAAGAAATAAAACTAAAAACCTATAGTGGTGACCTCTCTAAACTAGGGTCAGCTGAAAGATTTCTTAAACAGGTGCTTGATATCCCTTTTGCGTTCAAAAGAGTTGAAGCCATGCTATATAGGGCCAACTTTGATGCAGAAGTTAATTACCTGAGGAAGTCTTTTCAAACCCTTGAGGTAGCAAGTGAGGAATTGAAAAATAGCCGGCTGTTCCTCAAACTTCTTGAAGCTGTTCTCAGGACAGGAAACCGAATGAATGTGGGCACCAATCGAGGTGATGCTAAAGCTTTTAAGCTGGACACGCTCTTAAAACTTGTAGACATAAAGGGAACAGATGGAAAGACTACATTGCTTCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTGCAAATAGCGGTTCTGCAAATGGAAATGTTCAGAACCAAGTGAATTCCAAATTCAGTGAGGACGAATTCAAGAAGCAAGGATTGCAGGTTGTGGCTGGGCTCAGTAGGGACCTCAGCAATGTCAAAAAAGCTGCAGGAATGGATTCTGATGTCTTAAGCAGCTACGTCTCAAAACTTGAAAAGGGTCTTGATAACGTGAGAGTGGCTTTGCAACATGAGAAGCCGGATCTGCAAGGGAATTTCTCCCACTCCACGAAGCTATTTCTGAAAAATGCTGAAGAGGAAATCGTTAGGATTAAGGCTGATGAACGAAAGGCCTTATTTCTTGTGAAAGAAGCTACAGAATACTTTCACGGGAATGTGGCCAAGGAAGAAGCCCACCCTCTCAGAATCTTTATGATTGTTAGGGATTTCCTAAATATCTTGGACCAGGTATGCAGAGAAGTGGGAAGGATGCAGCAGGATAGAACCGTGATTGGTTCTTCCAGATCCTTCCGGATAGCTGTAAGTGCATCATTACCAGGTCTAAAGACGTACAATGCGAAACAAGATAGAAGTTCAGATGAAGAAAGCTCGTCACCCTAA 2721 0.4811 MKAHHLSFFFIILLSPSLVIATAKGVNTTQFRTVNESQPRRILHQPLFPANSAPPPGTDSPPPPPPYTTPPSPDTSIPFFHEDPAGPPPNQNQPPPSIPNATIANPTATQPTKPTKKVAIAISVGIVTLGMLSALAFFLYRHRVRQPIETQKLVGGNSQRIPDDPRVPPSSFLYIGTVEPRRTSVTDASETNGANRSPYHKLNSINRSERYRPSPELQPLPALSKPPDGNYPPVASSSSSDDEESHETVFHSPQGSSLSYEDSYYTPVSRHSSLANGGKSASLRSQTYSATSIPHSKRTSPKSRLAASSPDIRQVIIPPIKQDPPVTAPAPPPPAPPLSHPYQHQGKEVTNGHSRRPKFSAPPPAPNLTCLQSTNTTPQNISRNSLHPPPPPPPPPPPPRQLTPRKAGSPATGVSSSSATTHRQSCSPNQGAGSANSVTKSSENGDKSHSSSGRLEADDTEGAKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMESLFGCNSVKPAPKEPIRRSVLPPVEQENRVLDPKKSQNIAILLRALNVTRDEVSDALLDGNPEALGAELLETLVKMAPTKEEEIKLKTYSGDLSKLGSAERFLKQVLDIPFAFKRVEAMLYRANFDAEVNYLRKSFQTLEVASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGANSGSANGNVQNQVNSKFSEDEFKKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYVSKLEKGLDNVRVALQHEKPDLQGNFSHSTKLFLKNAEEEIVRIKADERKALFLVKEATEYFHGNVAKEEAHPLRIFMIVRDFLNILDQVCREVGRMQQDRTVIGSSRSFRIAVSASLPGLKTYNAKQDRSSDEESSSP 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0380 906 MobiDBLite consensus disorder prediction 384 404 - -
Lele52g0380 906 PANTHER FORMIN-RELATED 7 900 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele52g0380 906 MobiDBLite consensus disorder prediction 46 115 - -
Lele52g0380 906 MobiDBLite consensus disorder prediction 154 464 - -
Lele52g0380 906 Pfam Formin Homology 2 Domain 461 854 IPR015425 -
Lele52g0380 906 MobiDBLite consensus disorder prediction 182 211 - -
Lele52g0380 906 MobiDBLite consensus disorder prediction 447 464 - -
Lele52g0380 906 Gene3D Formin, FH2 domain 454 866 IPR042201 -
Lele52g0380 906 MobiDBLite consensus disorder prediction 250 307 - -
Lele52g0380 906 MobiDBLite consensus disorder prediction 322 340 - -
Lele52g0380 906 MobiDBLite consensus disorder prediction 49 73 - -
Lele52g0380 906 SUPERFAMILY Formin homology 2 domain (FH2 domain) 389 867 - -
Lele52g0380 906 MobiDBLite consensus disorder prediction 82 101 - -
Lele52g0380 906 SMART it6_source 457 869 IPR015425 -
Lele52g0380 906 MobiDBLite consensus disorder prediction 408 446 - -
Lele52g0380 906 MobiDBLite consensus disorder prediction 366 383 - -
Lele52g0380 906 ProSiteProfiles Formin homology-2 (FH2) domain profile. 457 880 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0380 Lele-ChrLele52 2235899 2239563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0380 414 896 FH2 protein (formin) Gene Family AT5G67470 70.287 0.0 662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0199 53 1663091 1666959 Lele52g0380 52 2235899 2239563 CCT
Lele54g0203 54 1744947 1751180 Lele52g0380 52 2235899 2239563 CCT
Lele55g1286 55 19337335 19341211 Lele52g0380 52 2235899 2239563 CCT
Lele56g1235 56 15691696 15697320 Lele52g0380 52 2235899 2239563 CCT
Lele52g0380 52 2235899 2239563 Lele52g0380 52 2235899 2239563 ECH
Lele49g0354 49 2089005 2092691 Lele52g0380 52 2235899 2239563 hybridization
Lele50g0377 50 2146479 2150176 Lele52g0380 52 2235899 2239563 hybridization