Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0362 ATGGGAATCACCGAGAGAAGAAAAGAATTTTGCTTTCAAGAGGAAGGTATATTCTGGGCTGCATTTCACAGTGCAATTTTAGGTGTCGGTCCAAAACATGTTTTACTTAGCGATTATATGATATATCAGCAGGGTTTCCTACCAGACATGGGAGGAGGCAATGGGCAAAAGTCGAAGATGGCTCGGGAGAGGAACATGGAGAAGAATAAGGCTGCAAAGGGGAGCCAGCTGGATTCAAACAAGAAAGCGATGAGCATCCAGTGCAAGGTGTGTATGCAAACTTTTATCTGCACCACATCGGAGGTGAAGTGCAAGGAGCATGCTGAAGCCAAACACCCAAAGTCTGATCTTTATACTTGCTTTCCTCATCTTAAAAAGTGA 381 0.4409 MGITERRKEFCFQEEGIFWAAFHSAILGVGPKHVLLSDYMIYQQGFLPDMGGGNGQKSKMARERNMEKNKAAKGSQLDSNKKAMSIQCKVCMQTFICTTSEVKCKEHAEAKHPKSDLYTCFPHLKK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0362 126 Gene3D - 46 126 IPR026939 -
Lele52g0362 126 MobiDBLite consensus disorder prediction 60 75 - -
Lele52g0362 126 Pfam 4F5 protein related disordered region 52 84 IPR007513 -
Lele52g0362 126 PANTHER OS07G0114300 PROTEIN 50 126 IPR039713 -
Lele52g0362 126 SUPERFAMILY Expressed protein At2g23090/F21P24.15 48 125 - -
Lele52g0362 126 MobiDBLite consensus disorder prediction 52 80 - -
Lele52g0362 126 Pfam Zinc-binding 87 124 IPR039438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0362 Lele-ChrLele52 2120908 2125134 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0183 53 1524638 1525294 Lele52g0362 52 2120908 2125134 CCT
Lele54g0186 54 1584662 1585318 Lele52g0362 52 2120908 2125134 CCT
Lele55g1302 55 19477412 19478068 Lele52g0362 52 2120908 2125134 CCT
Lele56g1250 56 15841263 15842129 Lele52g0362 52 2120908 2125134 CCT
Lele52g0362 52 2120908 2125134 Lele52g0362 52 2120908 2125134 ECH
Lele49g0337 49 1983071 1984309 Lele52g0362 52 2120908 2125134 hybridization
Lele50g0356 50 2039847 2042098 Lele52g0362 52 2120908 2125134 hybridization