Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0349 ATGGCCATTGACTGTGGTTTGCCATCCCCTCTCGGACCTCTAGTCTGCGAGAAGGACGCTAAGGCTTTGCAGTTCATTCAAGAGATGACCCAAAACACTGATTCCGTCCAAGAGAGGGTTCTGACCGAGATACTGAGCCGAAACGCCGACACGGAGTATCTCCGGCGGTTTCACCTCAATGGAGCCACAGACCGCGACGCTTTTAAGTCCAAGGTTCCTGTTGTTACGTACGAGGATTTGCAGCCTGATATCCAACGCGTCGCTAACGGCGATCGCTCCTTCATCTTTTCCTCTCACCCAATCTCCGAGTTCCTCACCAGTTCTGGAACATCAGCTGGTGAGAGAAAATTAATGCCAACCATCAGTGAAGAGATGGACCGTCGTCAGCTACTGTACAGTCTTCTGATGCCTGTAATAAACCTGTACATGCCGGGGTTGGACAAAGGGAAGGGCCTGTACTTTCTGTTTATCAAGGCGGAGACGAAGACTCCAGGAGGACTAGTGGCTCGTCCCGTTCTCACAAGCTATTACAAGAGCCAACAGTTCAAGAACCGATCCTATGACCCATATAATGTCTACACTAGCCCAAACGAAGCCATACTTTGCCCCGATTCCTTCCAAAGCATGTACACCCAAATGTTATGTGGTCTCATCATGCGCCATGAAGTGCTCAGAGTTGGAGCCGTTTTTGCCTCCGGCCTTCTTAGAGCCATCCGATTCCTTCAGCTAAACTGGCAGCAACTGTCCCTTGATATCTCCACCGGAACCCTCAACCCCAAAATCACTGACCCGTCTCTTAAGGATTGCATGGCCAAAATCCTGAAACCCGACCCCGAAATCGCAGATTTCATAACAAAAGAATGCTCCGGTGGAAACTGGGAAGGTATCATCACCAGAATCTGGCCTAACACAAAGTACCTTGACGTGATCGTCACGGGGGCTATGGCTCAGTATATTCCCACCCTGGACTATTACAGCGGTGGCTTGCCTAAGGCTTGTACCATGTACGCATCTTCCGAGTGTTACTTTGGGCTGAACCTAAACCCTATTTGCAAGCCGTCTGAGGTGTCCTACACCATCATGCCAAACATGGGCTACTTCGAGTTCTTGCCACATGATGACTCATCATCAACTCCTTCAACTCTCTCACGAGACTCGCCGCCTCACCTTGTGGACCTAGCCGACCTCGAAGTTGGTAAATACTACGAGCTCGTTATCACCACCTACTCTGGCCTATGCCGTTACCGTGTGGGCGATATCCTCCAAGTCACGGGGTTCCACAACAAAGCCCCACAGTTCCGGTTCGTGAGGAGAAAGAACGTGCTCTTGAGCATTGACTCAGACAAAACCGACGAGGCCGAGCTTCAAAAGTCCATTGAAAACGCCTCGGTGTTACTGAAAGAATTTAAGACCAGCGTGGTGGAGTATACGAGCTTTGCTGAGACGAAGAGTATTCCAGGACATTATGTTATTTACTGGGAATTGTTGATGAAGGACCCCTCTAACCCGCCTACCAATGAAGTCCTGAACCGGTGCTGCCTAGCCATGGAAGAGAGCCTTAACTCGGTTTATAGACAGGGGAGAGTAGCGGACCATTCTATTGGACCGTTAGAGATACGAGTGGTGAAGAATGGTACCTTTGAGGAACTGATGGACTACGCCATCTCAAGGGGAGCCTCTATCAACCAGTACAAAGTACCAAGGTGTGTTAGTTTCACTCCCATAATGGAACTACTCGACTCTAGGGTGGTCTCCGTACATTTTAGCCCAGCTGTTCCCCACTGGACTCCCGAACGTCGTCGTTGA 1806 0.5011 MAIDCGLPSPLGPLVCEKDAKALQFIQEMTQNTDSVQERVLTEILSRNADTEYLRRFHLNGATDRDAFKSKVPVVTYEDLQPDIQRVANGDRSFIFSSHPISEFLTSSGTSAGERKLMPTISEEMDRRQLLYSLLMPVINLYMPGLDKGKGLYFLFIKAETKTPGGLVARPVLTSYYKSQQFKNRSYDPYNVYTSPNEAILCPDSFQSMYTQMLCGLIMRHEVLRVGAVFASGLLRAIRFLQLNWQQLSLDISTGTLNPKITDPSLKDCMAKILKPDPEIADFITKECSGGNWEGIITRIWPNTKYLDVIVTGAMAQYIPTLDYYSGGLPKACTMYASSECYFGLNLNPICKPSEVSYTIMPNMGYFEFLPHDDSSSTPSTLSRDSPPHLVDLADLEVGKYYELVITTYSGLCRYRVGDILQVTGFHNKAPQFRFVRRKNVLLSIDSDKTDEAELQKSIENASVLLKEFKTSVVEYTSFAETKSIPGHYVIYWELLMKDPSNPPTNEVLNRCCLAMEESLNSVYRQGRVADHSIGPLEIRVVKNGTFEELMDYAISRGASINQYKVPRCVSFTPIMELLDSRVVSVHFSPAVPHWTPERRR 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0349 601 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 20 592 IPR004993 -
Lele52g0349 601 Pfam GH3 auxin-responsive promoter 26 571 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0349 Lele-ChrLele52 2054672 2056717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0349 17 589 EF-hand Containing Proteins AT1G23160 48.537 0.0 574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0337 51 1924847 1926887 Lele52g0349 52 2054672 2056717 ECH
Lele52g0349 52 2054672 2056717 Lele52g0349 52 2054672 2056717 ECH
Lele49g0324 49 1911046 1913104 Lele52g0349 52 2054672 2056717 hybridization
Lele50g0342 50 1969554 1970735 Lele52g0349 52 2054672 2056717 hybridization