LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele52g0346	ATGTCCACTTACCGCACTTGGAAAAAGAAAACTGGTCCACAAAGATATTACCAGTGGGTGGCAAGTCAACTTCACGGTTCAGAGTTGACGAACCGGTGCCCTTCTCCTCCTATCTGTTTCTGGCGTCCTCTCTTAACTCCAGGGTTCATTGTTCTCCATATAATCATAGTGATAGCTAGACTAAGTCTAATGGTCTCCATTTCCATGGGAAATCTTCAATTCCATAGAGTCCATATCTCTCTGTTTCTTCTTCATTTTCTAGTTCTGTTGGCATGGTTTCAGTCTCTCTCATCAGCCTATACCGTCCCCGGTAAGTATTTCATCAGCTGTGGTTCAAACAAGAACGTAACAGACACAGAAAGCCGTCGGGTTTTCTCGGAGGATTCTTCTCTTTCCCTATCCTTTCCGAAACAGAGTAGCGTCGAGGAAGCAAGCTCACAGTCATCGGACATATCTCCTATCTATCAAAAGGCAAGGGTCTTCCAACAGAAATTCTCGTACGACTTCCCAATCGATACTTCTGGCTCATATCTGGTACGCCTTCATTTCTTTGCTTTCTCTTCCTCAAGTAATCTCTCCACTGCTCGCTTCAATGTTTCGGTTCCTGGGTTCTGGCTCTTGCAAAACTTCTCTGCCAAAAATGCTAGCAAATCTCCTTTAGTAAAAGAATTCTTCATAAGCATCGATGCCACCGGCTTCAAAATCACTTTCAGGCCTCTGGAATCATCATTTGCGTTTGTAAATGCCATAGAACTCTTGCTTCTCCCCGATAATTTGATTCTAGATAATGCTCCGAGTGTGAGACCCAGTGGCAATTCTGCAGATTACACGGGTTTGCGGTCTCGGGTGTTACAGATGACTTACAGGCTTAATGTTGGAGGCCCTAATGTCTCAAGAAGCCAAGATGATCTTTTCAGATTCTGGGAAATTGATGATCCCTATTTGATTAACCCACAGGCTGCTAGTACTTCCACTTCAACTGTTGATATTAAATACCGGGACGAAAATTCTGAATCTGATATTCACTGGGCTACTAAGTATACCGCCCCCAATAGTGTTTACCTAAGTGACAAAAAGGTTCTTTTGAATTCCAACGACTCTGATTTCTTTAACATAACCTGGGGTCTTGCTGTAGAAAAGAAAGCTAATTATCTTGTTCGGGTTCACTTCTGTGACTTGGAGAGTTCTTCTCCTGATCTTACATACTTCAATCTGTTCATCTTCAATAACTCCCGGTCAATGATAAATTCCATCAACATATCTAACCAGTTGCCTGTTCCATTTTATTATGATTTTGTGGTCAATCCTGAGAACTCTGGATTCGTTAATATCAGCATAGCACCTCTTACTTCTCCAGTTCCAAATACGTATCTGAACGGACTGGAAATTATGAGAATTATTGATTCTTCAAATTCCGTTCCGGTGGAGAAATCCAATGCGAATAATAATCATCTCCCTCTCGTGCTGGGGTTATCGCTTGGAATTGGAGGTTTTGTCCTAATATCTATTATACTAGTTGGGTTCTTAATTTGGCGAGTGAAGCTCAGGAAGCAAGAACCTAAGCCTGTCGAGAATTCAGACTGGTTACCGTTGCCGTTTTATGGAGGAGGAAGTTCTCACAGCGGATGGACTGAAGGAACTCCCCATGGCTCTCCTCTTCCAAACTTAAATCTTGGGCTCAAAATCCCTTTGATTGAGGTCCTATCTGCAACCAACAACTTTGATAACAAAAGATTAATTGGAAAGGGTGGTTTTGGGAACGTCTACAAGGGAGTTCTCAGGAATGGTTTGAGAGTGGCTGTGAAAAGAAGTGAGCCTGGGTCAGGACAAGGCTTTTCAGAATTCCAGACAGAGGTTATGGTTCTGTCCAAAATTCGACACAGGCACCTTGTTTCCTTGATTGGGTATTGTAATGAAAGGTATGAAATGATTTTGGTTTATGAATATATGGAAAAAGGGACACTGAGGGATCATTTGTACAATTCAGATCTGCCAAGCTTGCCTTGGAAGCAGAGGCTTGAGATTTGCATCGGATCTGCGAGGGGTCTTCATTACCTTCACAAAGGAGCATCAGGAGGCATCATTCACCGAGACGTGAAGTCTACAAATATATTGCTGGATGAAAACCATGTTGCTAAAGTTGCTGACTTTGGCCTCTCAATATCAGTACCTCTTGAACATCAGCCTTATGTGAGCACAGGTGTTAAAGGCACTTTTGGGTATCTAGATCCTGAGTATTTTCGGTCACAACAGTTAACAGAAAAATCTGATGTTTACTCATTTGGCGTGGTACTTCTTGAAGTGTTATGTGCAAGACCAGCCATTGACCCTATGCTGCCACGGGAGCAGGTGAACTTGGCTGAATGGGGAATCCTTTGCAAGAACAAAGGAATGCTCCAAGAGATTATAGATCCTTCCATCAAGGGGCAAATAGATCCGAACTCGCTCAGGAAATTTAGCGAGGCAGTAGAGAAATGTTTACAGGAAGATGGTTCTGATAGGCCTAGCATGGGTGATGTATTGTGGGACTTGGAGTATGCACTACAGCTTCAGCAAGGCTCAATTCAGAGAGAACCCCACGAGGACAGCTCTAGTGCTGCTTCTGTATCAATTCAATTGCCCAATGTTCGGCGACTTCCTTCACTTTCTTCACTTGGTGAATCAGGTGAAGTGTCCATGACCATGATAAGGGAAGATGAATATAATAGCAAAGTAGGTTCAGTTTTCTCACAGTTGAAAATTGATGATGCGAGATAG	2757	0.4284	MSTYRTWKKKTGPQRYYQWVASQLHGSELTNRCPSPPICFWRPLLTPGFIVLHIIIVIARLSLMVSISMGNLQFHRVHISLFLLHFLVLLAWFQSLSSAYTVPGKYFISCGSNKNVTDTESRRVFSEDSSLSLSFPKQSSVEEASSQSSDISPIYQKARVFQQKFSYDFPIDTSGSYLVRLHFFAFSSSSNLSTARFNVSVPGFWLLQNFSAKNASKSPLVKEFFISIDATGFKITFRPLESSFAFVNAIELLLLPDNLILDNAPSVRPSGNSADYTGLRSRVLQMTYRLNVGGPNVSRSQDDLFRFWEIDDPYLINPQAASTSTSTVDIKYRDENSESDIHWATKYTAPNSVYLSDKKVLLNSNDSDFFNITWGLAVEKKANYLVRVHFCDLESSSPDLTYFNLFIFNNSRSMINSINISNQLPVPFYYDFVVNPENSGFVNISIAPLTSPVPNTYLNGLEIMRIIDSSNSVPVEKSNANNNHLPLVLGLSLGIGGFVLISIILVGFLIWRVKLRKQEPKPVENSDWLPLPFYGGGSSHSGWTEGTPHGSPLPNLNLGLKIPLIEVLSATNNFDNKRLIGKGGFGNVYKGVLRNGLRVAVKRSEPGSGQGFSEFQTEVMVLSKIRHRHLVSLIGYCNERYEMILVYEYMEKGTLRDHLYNSDLPSLPWKQRLEICIGSARGLHYLHKGASGGIIHRDVKSTNILLDENHVAKVADFGLSISVPLEHQPYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPAIDPMLPREQVNLAEWGILCKNKGMLQEIIDPSIKGQIDPNSLRKFSEAVEKCLQEDGSDRPSMGDVLWDLEYALQLQQGSIQREPHEDSSSAASVSIQLPNVRRLPSLSSLGESGEVSMTMIREDEYNSKVGSVFSQLKIDDAR	918

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele52g0346	918	ProSitePatterns	Protein kinases ATP-binding region signature.	580	602	IPR017441	GO:0005524
	Lele52g0346	918	Gene3D	Transferase(Phosphotransferase) domain 1	650	870	-	-
	Lele52g0346	918	SUPERFAMILY	Protein kinase-like (PK-like)	556	845	IPR011009	-
	Lele52g0346	918	CDD	STKc_IRAK	580	845	-	-
	Lele52g0346	918	SMART	serkin_6	574	847	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele52g0346	918	Gene3D	-	283	466	-	-
	Lele52g0346	918	Gene3D	-	105	254	-	-
	Lele52g0346	918	Pfam	Protein tyrosine and serine/threonine kinase	577	841	IPR001245	GO:0004672\|GO:0006468
	Lele52g0346	918	Gene3D	Phosphorylase Kinase; domain 1	554	649	-	-
	Lele52g0346	918	ProSiteProfiles	Protein kinase domain profile.	574	847	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele52g0346	918	FunFam	Receptor-like protein kinase FERONIA	650	866	-	-
	Lele52g0346	918	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	694	706	IPR008271	GO:0004672\|GO:0006468
	Lele52g0346	918	FunFam	Putative receptor-like protein kinase	105	256	-	-
	Lele52g0346	918	FunFam	receptor-like protein kinase FERONIA	545	649	-	-
	Lele52g0346	918	PANTHER	OS07G0166700 PROTEIN	561	851	IPR045272	GO:0004714\|GO:0006468
	Lele52g0346	918	Pfam	Malectin-like domain	108	465	IPR024788	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele52g0346	Lele-ChrLele52	2023384	2026438	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele52g0346	79	918	Receptor kinase-like Gene Family	AT2G23200	44.767	0.0	639

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Lele52g0346		Malectin_like	3.8e-35	CL0202