Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0341 ATGGATAGACTTGGCAGATTTCTTGAGGGAGCATTTGCAGTTATGCTGCTGTTCAACGGCTTTATTTACCAGTGGGAGTTATCGCCACATCTACAATTAGAGGATTTGCTTCATGCCGAAATAATCAAACACTTCTGCGTGTTTCAGTTTCCTGCATCACTTGATTCTCTTGTCGAAATTGGCAGTGGAAAAGTAAATATCCATGTGTTGATGGCTCTGGCAGCCTTTGCGTCCATATTTATGGGAAATTCTTTGGAGGGAGGATTGCTTCTTGCCATGTTTAATCTGGCTCATATAGCTGAGGAATACTTCACCAGCCGTTCAATGATTGATGTTAAAGAGTTGAAGGACAATAATCCAGAATTTGCCCTTGTGCTAGAAACTGACAGTGATGATAAACTTCCTAATACCGTTGACTTGGCGTACAAGAGGGTTCCTGTGCATGATGTAACAGTAGGATCATATATCTTGGTTGGAGCTGGTGAGGGCCGTGCAGCTTGTTTGTGGTACTTGTCTTGTCCAAGTAAAATTGTGCTTCCTTTAGGCCCTTTATCACTGAAAGAAGCACAGTTGAATAGACCAAAGCTTCAAAGGTGGCTGGATGAATTTGGTGAACAATACAGCAAAGTTGTTGTGGTGTTATCAGTTGCTATCGCTGTCATTGGGCCACTCATATTTAAGTGGCCATTTATTAGTACACCAGGAAATTATGAATGTGCTTTGTTGCTTTCGCACATCAATCTTTCAGCTTATTTACTGTCTGGTTATGCAGCTTGCCGAGGTTCAATTTATAGAGCGCTGGGCCTCATGGTGGCTGCGTCTCCATGTGCCTTGGCTGTAGCTCCATTAGCATACGCTACAGCAATCAGCTCCTGTGCAAAAAAGGGGATATTGCTGAAAGGTGGACATGTTCTGGATGCTCTATCTTCTTACCGTACAATCGCATTTGACAAAACAGGGACACTGACAACTGGTGGACTTGTATTCAAGGCAATTGAACCAATTTACGGTCATAAGGTTACAAATAACATAACAAAAATGTCTTCCTCCTGTATTCCTAGCTGTGAACAAGAAGCTCTTGCTGTTGCTGCTTCCATGGAAAAGGGTACCACTCACCCCATTGGAAGGGCAGTTGTTGACCACAGTGATGGGAAAGACCTCCCATCTGTTTCTGTTGAAAGTTTTGAGTATTTTCCTGGCAGAGGACTTGTTGCTACTCTCAACAGCATCCAGTCAGAAACTGGAGGAGCCAAACTTTTAAAAGCACCACTTGGATCTGTGGATTTTATCACCTCATTATGTCAATCTGAAGACGAGTCTAAAAGGATCAATGAAGCAGTTAATGCATCTTCTTACGGCAGTGAATTTGTTCATGCTGCCCTTTCAGTTGACAAAAAGGTAACGCTGATTCATTTAGAGGATAGGCCTCGGCCTGGGGTTTCTAATGTCATACGGGAATTGCGAGATGAAGCAGACTTTCGCGTGATGATGTTAACTGGTGACCACGAGTCCAGTGCAAGGAGAGTTGCAACTGCTGTGGGCATCAGTGAGGTTTATTGCAACCTTAAGCCTGAAGATAAGTTGAGTCATGTGAAGGACATCTCAAGGGATATGGGTAGGGGACCTTTAGATGTATTGCTTCCGATTGTTCATTTGTTTTGTATATGTTGTGATTACTGA 1680 0.4304 MDRLGRFLEGAFAVMLLFNGFIYQWELSPHLQLEDLLHAEIIKHFCVFQFPASLDSLVEIGSGKVNIHVLMALAAFASIFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMIDVKELKDNNPEFALVLETDSDDKLPNTVDLAYKRVPVHDVTVGSYILVGAGEGRAACLWYLSCPSKIVLPLGPLSLKEAQLNRPKLQRWLDEFGEQYSKVVVVLSVAIAVIGPLIFKWPFISTPGNYECALLLSHINLSAYLLSGYAACRGSIYRALGLMVAASPCALAVAPLAYATAISSCAKKGILLKGGHVLDALSSYRTIAFDKTGTLTTGGLVFKAIEPIYGHKVTNNITKMSSSCIPSCEQEALAVAASMEKGTTHPIGRAVVDHSDGKDLPSVSVESFEYFPGRGLVATLNSIQSETGGAKLLKAPLGSVDFITSLCQSEDESKRINEAVNASSYGSEFVHAALSVDKKVTLIHLEDRPRPGVSNVIRELRDEADFRVMMLTGDHESSARRVATAVGISEVYCNLKPEDKLSHVKDISRDMGRGPLDVLLPIVHLFCICCDY 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0341 559 Pfam haloacid dehalogenase-like hydrolase 311 532 - -
Lele52g0341 559 SUPERFAMILY HAD-like 303 539 IPR036412 -
Lele52g0341 559 SUPERFAMILY Calcium ATPase, transmembrane domain M 69 362 IPR023298 -
Lele52g0341 559 ProSitePatterns E1-E2 ATPases phosphorylation site. 317 323 IPR018303 -
Lele52g0341 559 Pfam E1-E2 ATPase 185 295 - -
Lele52g0341 559 Gene3D - 338 428 IPR023299 GO:0000166
Lele52g0341 559 Gene3D - 463 546 IPR023214 -
Lele52g0341 559 Gene3D - 150 328 - -
Lele52g0341 559 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 187 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0341 Lele-ChrLele52 1999157 2004516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0341 27 541 Primary Pumps ATPases AT4G37270 61.922 0.0 630