Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0340 ATGGTTGGTGAGGGAATTAATGATGCCCCAGCACTTGCTGCTGCAACAGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCCATAGCAGTTGCAGATGTGCTGTTGCTTCGGGAAAATATTTCTGCAGTACCGTTTTGTATTGCCAAGTCTCGCCAAACAACTTCACTGATTAAACAAAATGTTGCCCTGGCATTATCCAGCATTTTGATGGCGTCTCTTCCATCAGTCTTTGGATTTCTGCCCTTGTGGTTAACGGTTCTGTTACATGAAGGTGGAACCCTACTTGTTTGTCTGAATTCCATACGTGGTTTACATGAACCAGCTTGGTCATGGAAGCATGATGTACTACATTTGATAAACAGAGTAAAATCTAGACTTCTGTCACTCACCATAAACAACACTAGCTCGAGCGCCTTGGACACCGCAAATTTGTGA 441 0.4422 MVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSSILMASLPSVFGFLPLWLTVLLHEGGTLLVCLNSIRGLHEPAWSWKHDVLHLINRVKSRLLSLTINNTSSSALDTANL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0340 146 Gene3D - 1 70 IPR023214 -
Lele52g0340 146 PRINTS P-type cation-transporting ATPase superfamily signature 26 38 - -
Lele52g0340 146 PRINTS P-type cation-transporting ATPase superfamily signature 2 21 - -
Lele52g0340 146 PRINTS H+-transporting ATPase (proton pump) signature 2 18 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele52g0340 146 PRINTS H+-transporting ATPase (proton pump) signature 34 59 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele52g0340 146 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 1 144 - -
Lele52g0340 146 SUPERFAMILY HAD-like 1 102 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0340 Lele-ChrLele52 1997949 1998894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0340 1 127 Primary Pumps ATPases AT4G37270 81.102 5.23e-70 223