Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0335 ATGGGCATATCTCTCGCGGTCTTGGAATTCAATGTAGGCCTTAACAGAGACGGTGCTTTGTTGCTGTCGTTCAAGTACTCGGTTGTGAGTGATCCTCTTGGCGTGCTTGGAAGCTGGAATTACAGCAACGACACACCTTGTTCATGGAATGGAGTTACGTGTGCTCAAGCTCGAGTGATTGGCTTATCTCTTCCGAATTCTCAGCTCGTTGGTTCGATTCCTTATGGTCTTGGGTTGATTGAGCACCTCAGAATTCTCGACCTTTCGGGCAATTCGCTCAATGGGTCTCTTCCATCTTCACTTTTTCAGGCTATTGAACTCCAGTCACTTAATTTGTCTGCTAATTTGATAGGTGGCGAGATTCCAGACTCCATAGTACAGCTAAGAAATCTTCGGGTTCTTAACCTTTCTGACAATGCCTTGGCTGGAAAATTACCTGCCAATCTGGCAAATATGCAGAATCTAACGGTGGCTTCTTTGAATAATAATTACTTGTCGGGCGGTCTTCCTGGTGGGTTTCAAACGTTACAGGATTTAGATCTATCTTCGAATTTGTTCAATGGATCTCTGCCTCCGGATTTTGGCGGGGCTAGTTTGCGTTACCTGAACATCTCCTACAACAACATTTCCGGGAGAATCCCTCCAGAATATGCCGAGAAAATCCCAGGTCACGCCACCGTCGACCTTTCCTTCAACAATCTCACCGGCCAAATTCCTGACTCCGTAGTTTTAATCAATCAACGATCCAAGTCATTTTCCGGGAATCCTGATCTTTGCGGTGAACCAACCAAGAATCCATGTCCTATTCCTTCATCTTCTCCACCAAATATGGCCGTTGCTACATCCCCTGCTCTGGCTGCATTTCCAAACACGTTTGACTCTCCTCCTGATTTCGGAGCTTCACCATCTGTATCTCCACAATCTGAGCAAAACGGGATTCGACGAACAACAATTATAGGAATCGTAGTTGGAGATATTGTTGGCATTGCAATCATAGCTTTAATTTTTGTGTATGTCTACAGGTTGAAGAGAAAGGAAAACATGGAGAGCGCTTTGAAGAAGGAAGCTACTGCAGTGAGAAGTGATTGGTCACTACCATCATTACCCGAGTCAAGAGGGTTCAGAAGGTGGTCGTGCTTGCGCAAGAATGCCGAAGATGAAGAGTCCACCGACGACACCACGAGCTCTTCCGGCAGCGAAGCGGGAGCAACAAGTGGGCAAAACCAAAAGATTCATGACAATAGGAGGCAACATGAACAAGAAGCAGGGCAGGGGAAAACAGGGACACTGATAACTGTGGACGGTGAAAAAGAGTTTGAGCTCGAAACACTGCTAAAGGCTTCAGCATTTATATTGGGGGCAACAGGTTCCAGTATAATGTACAAAGCCGTGCTGGAAGACGGATCGGCATTAGCGGTTCGAAGAATCGGCGAGAACGGGCTCGAACGGTTCAAGAACTTGGAGACACAAGCTCGGGTCTTAGCCAAATTGGTGCACCCCAATCTGGTTCGTGTTCGTGGCTTCTACTGGGGAAACGAAGAGAAGCTCATCATCTACGACTTCGTCCCAAACGGCAGCCTAGCAAATTTTCGTTACAGGAAGGTGGGCTCTCCCCCTTGTCACCTACCATGGGAGGTCAGACTCAAGATTGCGAGAGGGGTGGCACGTGGCCTGGCTTATCTCCACGACAAGAAGCACGTGCATGGAAATCTCAAGCCCAGCAATATTCTGTTGGGCAACGACATGGAGCCCAAGATTGGAGACTTTGGGCTCGAGAGAATTGTCACGGGAGATTCCAGTTATAAAGCTGGCGCGTCCGCTCGGATATTTGGGAGCAAGAGATCCACGGCCTCTCGGAATAGCTTTCCGGACATTGCAGTTGGGCCTAGCCCGAGCCCGAGCCCGAGTGCGATAGGTGGGGTATCTCCTTACCATGCACCTGAGTCGCTCAGGAGCCTGAAGCCTAATCCCAAGTGGGATGTATACTCGTTCGGCGTCATTTTCTTGGAGCTACTGACCGGGAAGATTGTGGTCTTGGATGATATGGGTCAACCACTTGGGCTTTTGGTTGAGGACAAGACACGGGCTCTTCGGATGGCTGACATGGCGATTCGTGCTGACATGGAGGGAAAAGAGGACTCCTTGTTGGCTTGGTTCCAGTTGGGGTATAGCTGTGTGTCTAGCGCCCCCCAGAAGAGGCCGTCAATGAAAGAAGTGTCGCAAGGGCGTGTTGTTGAAACTGCGAATGATCTAATAATGCCACATGAGAAGTGGCTTTGCCAGACAGGAAAGAAGCAGGAAATGGCGACCAACATTGGGATAATGGATTCGGCTTACTTCGTTGGTAGATCTGAGATTATCGCCTGGATCAACTCCTCACTCCAATTAAGTCTCTCCAAAGTCGAAGAGGCTTGTTCTGGTGCGGTACACTGCCAGCTTATGGATGCGGTCCATCCTGGGATTGTGCCGATGCACAAGGTCAATTTTGATGCTAAGAATGAGTACGAGATGATTCAGAACTACAAGGTCCTTCAAGACGTCTTCAATAAACTCAAAATCACCAAGCACATCGAGGTCAGCAAGCTTGTGAAAGGAAGACCGCTGGATAATTTGGAGTTCATGCAATGGATGAAACGATATTGTGACTCTGTCAATTCGGGACTTCTGAACTCTTACAATCCTCTGGAAAGGAGAGAGTCCTGTAAGGGAGGAAGAGAAGCAAACAAGAAATCCTCTCAATCCCAGTCCTCTGCTAAGGTTTCTGCTGCCGCGAAGTCTCACTCTTCTCATAATGCACGAAGAAATGATTTATCTTCTGGAAACAATGCAAATCAAGCAGCGAGAGCCACAAAACCTCCAAGCAGCGGCCCTTCATACGATGAACAGATCACGGAGTTAAAACTGTCCATTGACGGCCTTGAAAAAGAGAGGTATTTCTACTTTGCAAAACTGAGGGATATTGAGATACTCTGCCAAAGTCCTGGACTAGAACACTTACCGGTTGTCGCAGCAATTCAGAAGATATTATATGCCACAGATGATGATGCAACGGTTGTCGCGGAAGCTCAAGCCCTGGTTTCGGTTCAGCAGAAGGAAGGTGAGAGACTGAGCCCCATCACAGAGGTTTCGGAGGGGAAAGGCAGTACCGAAAATCAGAAGAGAAAGATCATTGTGAATCCAGACTTTGATGCGACTGGCATCATAACATTGTCGCCAAGGCAAAGGCTTTCTGATGTTTCGGATGTTCATTGTAGCGGGTCACCTCTCATGACTTATATCAGCGTTCAAGATCCCCTTCTTTTCTTGAGAATCTGTCGTGTTGTCTTTGAAAAGAAGGAGGAGAAAAGAGTAGAAACAGTGGAATACCGATCATCAGCAGGGCAAGGGCAACAACAAGTGAGGAAGGTGGAGGTGATTCACCAGCCTCATCCCAATCCCAAATCTAATACAAGTGGTGGTGTTCTTTCTAATGCTGCTGCTTCTGTCGCCTCCACCTTACAATCCGCCAAAGATGCCTTATCTCAAAACTAA 3531 0.4775 MGISLAVLEFNVGLNRDGALLLSFKYSVVSDPLGVLGSWNYSNDTPCSWNGVTCAQARVIGLSLPNSQLVGSIPYGLGLIEHLRILDLSGNSLNGSLPSSLFQAIELQSLNLSANLIGGEIPDSIVQLRNLRVLNLSDNALAGKLPANLANMQNLTVASLNNNYLSGGLPGGFQTLQDLDLSSNLFNGSLPPDFGGASLRYLNISYNNISGRIPPEYAEKIPGHATVDLSFNNLTGQIPDSVVLINQRSKSFSGNPDLCGEPTKNPCPIPSSSPPNMAVATSPALAAFPNTFDSPPDFGASPSVSPQSEQNGIRRTTIIGIVVGDIVGIAIIALIFVYVYRLKRKENMESALKKEATAVRSDWSLPSLPESRGFRRWSCLRKNAEDEESTDDTTSSSGSEAGATSGQNQKIHDNRRQHEQEAGQGKTGTLITVDGEKEFELETLLKASAFILGATGSSIMYKAVLEDGSALAVRRIGENGLERFKNLETQARVLAKLVHPNLVRVRGFYWGNEEKLIIYDFVPNGSLANFRYRKVGSPPCHLPWEVRLKIARGVARGLAYLHDKKHVHGNLKPSNILLGNDMEPKIGDFGLERIVTGDSSYKAGASARIFGSKRSTASRNSFPDIAVGPSPSPSPSAIGGVSPYHAPESLRSLKPNPKWDVYSFGVIFLELLTGKIVVLDDMGQPLGLLVEDKTRALRMADMAIRADMEGKEDSLLAWFQLGYSCVSSAPQKRPSMKEVSQGRVVETANDLIMPHEKWLCQTGKKQEMATNIGIMDSAYFVGRSEIIAWINSSLQLSLSKVEEACSGAVHCQLMDAVHPGIVPMHKVNFDAKNEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVNSGLLNSYNPLERRESCKGGREANKKSSQSQSSAKVSAAAKSHSSHNARRNDLSSGNNANQAARATKPPSSGPSYDEQITELKLSIDGLEKERYFYFAKLRDIEILCQSPGLEHLPVVAAIQKILYATDDDATVVAEAQALVSVQQKEGERLSPITEVSEGKGSTENQKRKIIVNPDFDATGIITLSPRQRLSDVSDVHCSGSPLMTYISVQDPLLFLRICRVVFEKKEEKRVETVEYRSSAGQGQQQVRKVEVIHQPHPNPKSNTSGGVLSNAAASVASTLQSAKDALSQN 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0335 1176 FunFam Leucine-rich repeat receptor-like protein kinase 175 269 - -
Lele52g0335 1176 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 62 741 - -
Lele52g0335 1176 SUPERFAMILY Protein kinase-like (PK-like) 451 740 IPR011009 -
Lele52g0335 1176 SMART LRR_typ_2 173 196 IPR003591 -
Lele52g0335 1176 SMART LRR_typ_2 80 104 IPR003591 -
Lele52g0335 1176 SMART LRR_typ_2 128 152 IPR003591 -
Lele52g0335 1176 Pfam Leucine Rich repeat 198 211 IPR001611 GO:0005515
Lele52g0335 1176 Gene3D Phosphorylase Kinase; domain 1 412 521 - -
Lele52g0335 1176 FunFam Os07g0541700 protein 522 612 - -
Lele52g0335 1176 MobiDBLite consensus disorder prediction 394 410 - -
Lele52g0335 1176 MobiDBLite consensus disorder prediction 383 429 - -
Lele52g0335 1176 SUPERFAMILY EB1 dimerisation domain-like 959 1016 IPR036133 GO:0008017
Lele52g0335 1176 FunFam Microtubule-associated protein RP/EB family member 1C 958 1036 - -
Lele52g0335 1176 MobiDBLite consensus disorder prediction 1123 1156 - -
Lele52g0335 1176 FunFam Leucine-rich repeat receptor-like protein kinase 14 171 - -
Lele52g0335 1176 CDD STKc_IRAK 452 741 - -
Lele52g0335 1176 Pfam Calponin homology (CH) domain 783 875 IPR001715 GO:0005515
Lele52g0335 1176 Pfam Protein kinase domain 452 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0335 1176 MobiDBLite consensus disorder prediction 899 960 - -
Lele52g0335 1176 Pfam Leucine rich repeat N-terminal domain 15 54 IPR013210 -
Lele52g0335 1176 Gene3D Ribonuclease Inhibitor 174 269 IPR032675 -
Lele52g0335 1176 SUPERFAMILY L domain-like 19 262 - -
Lele52g0335 1176 ProSiteProfiles Calponin homology (CH) domain profile. 780 882 IPR001715 GO:0005515
Lele52g0335 1176 ProSiteProfiles Protein kinase domain profile. 416 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0335 1176 Gene3D - 958 1034 - -
Lele52g0335 1176 ProSiteProfiles EB1-C terminal (EB1-C) domain profile. 948 1018 IPR004953 GO:0008017
Lele52g0335 1176 Gene3D Transferase(Phosphotransferase) domain 1 522 752 - -
Lele52g0335 1176 FunFam RP/EB family microtubule-associated protein 773 900 - -
Lele52g0335 1176 Gene3D Ribonuclease Inhibitor 14 173 IPR032675 -
Lele52g0335 1176 SUPERFAMILY Calponin-homology domain, CH-domain 772 898 IPR036872 -
Lele52g0335 1176 Gene3D - 773 900 IPR036872 -
Lele52g0335 1176 MobiDBLite consensus disorder prediction 907 960 - -
Lele52g0335 1176 Pfam Leucine rich repeat 82 141 IPR001611 GO:0005515
Lele52g0335 1176 Pfam EB1-like C-terminal motif 973 1011 IPR004953 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0335 Lele-ChrLele52 1968640 1977946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0335 14 738 Receptor kinase-like Gene Family AT4G37250 58.824 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele52g0335 Pkinase 3.8e-29 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0335 52 1968640 1977946 Lele52g0335 52 1968640 1977946 ECH
Lele49g0309 49 1821644 1824681 Lele52g0335 52 1968640 1977946 hybridization
Lele50g0325 50 1888388 1890082 Lele52g0335 52 1968640 1977946 hybridization