Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0327 ATGGCCACCGACTTCAGTTGCATCCCCATCATTGATATTAGCGCCCTTGTAGCCCAGTCCGATGACCCAAATATTGCTGACGACCCTGCAGTCTCCGAGGTTGTTAGACAATTGGATCGGGCTTGTAGAGAGGCAGGGTTCTTCTACGTGAAAGGACATGGTATTCCTGCTACTCTTCTCAAAGAGGTTAAAGAAGTAACACGCAGATTCTTTCAACTTCCATACAAAGAAAAGACGAAGATCAAAATGACTGCGGCTACAGTGACCGAGGGCATGTATGGAACGCTTGGCAAACCCATGGAATGTATTTTGGAACTCATGATTATGAAGTTTGGACTTATCACTTCTCATTTTGCTTCTGTGGTTGGACTCTTTTTTTCCTCACGTGGTTCCTTGGTGCCAGCAGAGCTTGCACTAAAAATCATGAGGGGAATTGCTTTAGCATTAGGTGGATCACCAGATGAATTTGAAGGTCACAGAGCTGGGGATCCATTTTGGGTTATGAGACTTATTGGTTATCCAGGTGTATCTACTGCAAATGGAAAAGCTGATCTCAAAAACGACATTGGATGTGGAGCCCACACTGATTATGGTTTATTGACACTGCTTAATCAGGATGACGATATAAATGCACTCCAGGTATGCACTTCACTCAGATAA 660 0.4394 MATDFSCIPIIDISALVAQSDDPNIADDPAVSEVVRQLDRACREAGFFYVKGHGIPATLLKEVKEVTRRFFQLPYKEKTKIKMTAATVTEGMYGTLGKPMECILELMIMKFGLITSHFASVVGLFFSSRGSLVPAELALKIMRGIALALGGSPDEFEGHRAGDPFWVMRLIGYPGVSTANGKADLKNDIGCGAHTDYGLLTLLNQDDDINALQVCTSLR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0327 219 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 91 IPR026992 -
Lele52g0327 219 SUPERFAMILY Clavaminate synthase-like 3 215 - -
Lele52g0327 219 Gene3D - 1 105 IPR027443 -
Lele52g0327 219 Gene3D - 132 218 IPR027443 -
Lele52g0327 219 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0327 Lele-ChrLele52 1927426 1929966 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0311 51 1780946 1784053 Lele52g0327 52 1927426 1929966 ECH
Lele52g0327 52 1927426 1929966 Lele52g0327 52 1927426 1929966 ECH
Lele49g0302 49 1780236 1783428 Lele52g0327 52 1927426 1929966 hybridization
Lele50g0317 50 1848224 1851957 Lele52g0327 52 1927426 1929966 hybridization