Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0324 ATGCCCGCCGGATTAACTCTCCTGGACCGCTTGATTTCTCTTCGCCTCGATTCCAACTGGTTTAACGGAACCCTTCCCCCCTTGAACCAGTCCTCGCTTCGAATCTTCAATGTGTCCGGAAACAATTTGACCGGGCCGGTTCCTATGACGTCTACACTCGGTCGTTTTCCCCTGGCGTCGTTCACCGGGAACCAGGGTCTCTGCGGGGAGATCATTCGCACAGCGTGTAATTCTCGGTCTCCGTCCTTCAGTCCCTCCAATGCCTCCACCTCCGCGGCGCCACTTGGGCAAAGCGCGGAATCGCAGGGAATCGGGATCGTTCCTTCACATTCATCGACTAAAAAGAAGCATAAGGACGCCGCCTTGATTCTAGGGTTTACCATTGGGTTCTCGGTGCTCATTGCGTCCATCCTGTTTGCAATTGCATTGTTGAGGAGCAAACGAAGCAGTTCCAGAAGACCAGAGAGCACGAAAATACAAGAGTATTTGGAAACCAAAGACGTGAATGCGCCTCCTCCTGCATCTTTAGCCGTCGAAACAGAAATAGAGCAAAATCGGGAATGGAGCGAGAAGGCAAAGAGGATAGAGAAAATAAGAGAAGCACATAAGAGTGGGAATTTGGTGTTCTGCAGTGGGGAGCCACAGTTTCTCTTTAACCTCATGCATGGTTCGAAATCAACGAGAGCGAAGCCTCTTCACTGGACGTCATGCTTAAAGATAGCTGAAGATGTAGCCCATGGAGTCGCCTATATACATCAAGCCTCGAGATTAATCCATGGCAACCTAAAGTCGACCAATGTCCTTCTTGGCGTGGACTTTGAAGCTTGTGTTACAGACTATGGCTTGGCCTTCCTTGCGGACTTTTCATCGACTGAAGACCCTGACTCTGCTGCTTATAAAGCACCAGAGACTTGCAACTCTAGCCACCGAGCCACTCCCAAGTCCGATGTATATGCCTTTGGGGTGCTTCTACTAGAGCTTCTTACGGGTAAACATCCTTCTCAACATCCTTTCCTTGTGCCCGCGGATATGCAACATTGGGTTAGAGCTATGAGGGATGATGATGGTGCTGAACATAATGAGCTTGGGATGCTCACCGAAGTCGCTATTATTTGCAGTGCAACGTCGCCTGAGCAGAGGCCGGCGATGTGGCAAGTCTTGAAGATGATACAGGAAATAAAGGACAGGGTAACGATGGAGGATACAACAACTGCTAGGGTTTCATAA 1227 0.498 MPAGLTLLDRLISLRLDSNWFNGTLPPLNQSSLRIFNVSGNNLTGPVPMTSTLGRFPLASFTGNQGLCGEIIRTACNSRSPSFSPSNASTSAAPLGQSAESQGIGIVPSHSSTKKKHKDAALILGFTIGFSVLIASILFAIALLRSKRSSSRRPESTKIQEYLETKDVNAPPPASLAVETEIEQNREWSEKAKRIEKIREAHKSGNLVFCSGEPQFLFNLMHGSKSTRAKPLHWTSCLKIAEDVAHGVAYIHQASRLIHGNLKSTNVLLGVDFEACVTDYGLAFLADFSSTEDPDSAAYKAPETCNSSHRATPKSDVYAFGVLLLELLTGKHPSQHPFLVPADMQHWVRAMRDDDGAEHNELGMLTEVAIICSATSPEQRPAMWQVLKMIQEIKDRVTMEDTTTARVS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0324 408 Gene3D Ribonuclease Inhibitor 1 82 IPR032675 -
Lele52g0324 408 Pfam Protein tyrosine and serine/threonine kinase 220 388 IPR001245 GO:0004672|GO:0006468
Lele52g0324 408 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 211 - -
Lele52g0324 408 SUPERFAMILY Protein kinase-like (PK-like) 217 395 IPR011009 -
Lele52g0324 408 Gene3D Transferase(Phosphotransferase) domain 1 148 407 - -
Lele52g0324 408 SUPERFAMILY L domain-like 5 68 - -
Lele52g0324 408 MobiDBLite consensus disorder prediction 83 102 - -
Lele52g0324 408 ProSiteProfiles Protein kinase domain profile. 96 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0324 Lele-ChrLele52 1912941 1915094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0324 217 401 Receptor kinase-like Gene Family AT3G50230 60.847 1.09e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele52g0324 PK_Tyr_Ser-Thr 2.5e-19 CL0016