Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele52g0318 | ATGAAGATTCACTCTCTCCCCCTCCCTTTCGATCAAACTCGCCGAGAGAGAGCGACGGACGGTGAAGCGGCAGAAGGTGGAGTGAGAGATAGAGAGATGCCGACCAGGAAAAGAGGGGCCGTTGAGCTCGAAGGAGAGAGAAGATACAAAGGGATTAGGATGAGGAAGTGGGGCAAGTGGGTCGCCGAGATTCGAGAGCCCAATAAACGATCTAGGATTTGGCTCGGTTCCTACTCCACTCCCGTCGCGGCGGCGCGGGCCTACGACACCGCCGTTTTCTATCTCAGGGGACCATCGGCCCGCCTTAATTTCCCTGACCTTCTCGAAGGCGGCGGCTTTGGTGGCTGCGACTGCGACCTGTCGGCGGCTTCAATTAGGAAGAAAGCGACGGAGGTTGGCGCCAGAGTCGATGCTCTTCAGGCTGCTCTCCACCATCACCACCATGCTTCGGTGTCGCCGGAGCTCATGTCACGCAGCGCAGGCGCCGGGGAGTTTTTGGGGCGGGTTGATCTTAACAAGATACCAGAACCCGAGAATTCGGACAGCGCTGCGAGTGAGATAGGAAGCACAAGCAATATCTATTCTGCAACTCAGCTCTTGCTTCTCCGACCGGAGAGAGGCTATCGTTCAGCATGA | 636 | 0.5708 | MKIHSLPLPFDQTRRERATDGEAAEGGVRDREMPTRKRGAVELEGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPDLLEGGGFGGCDCDLSAASIRKKATEVGARVDALQAALHHHHHASVSPELMSRSAGAGEFLGRVDLNKIPEPENSDSAASEIGSTSNIYSATQLLLLRPERGYRSA | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele52g0318 | 211 | PRINTS | Ethylene responsive element binding protein signature | 87 | 107 | IPR001471 | GO:0003700|GO:0006355 | |
Lele52g0318 | 211 | PRINTS | Ethylene responsive element binding protein signature | 49 | 60 | IPR001471 | GO:0003700|GO:0006355 | |
Lele52g0318 | 211 | Gene3D | AP2/ERF domain | 47 | 106 | IPR036955 | GO:0003700|GO:0006355 | |
Lele52g0318 | 211 | SUPERFAMILY | DNA-binding domain | 48 | 106 | IPR016177 | GO:0003677 | |
Lele52g0318 | 211 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Lele52g0318 | 211 | CDD | AP2 | 48 | 107 | IPR001471 | GO:0003700|GO:0006355 | |
Lele52g0318 | 211 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED | 42 | 181 | - | - | |
Lele52g0318 | 211 | Pfam | AP2 domain | 48 | 97 | IPR001471 | GO:0003700|GO:0006355 | |
Lele52g0318 | 211 | ProSiteProfiles | AP2/ERF domain profile. | 48 | 105 | IPR001471 | GO:0003700|GO:0006355 | |
Lele52g0318 | 211 | SMART | rav1_2 | 48 | 111 | IPR001471 | GO:0003700|GO:0006355 | |
Lele52g0318 | 211 | MobiDBLite | consensus disorder prediction | 9 | 34 | - | - | |
Lele52g0318 | 211 | FunFam | Ethylene-responsive transcription factor 2 | 47 | 106 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele52g0318 | Lele-ChrLele52 | 1881378 | 1882013 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele52g0318 | 26 | 181 | AP2-EREBP Transcription Factor Family | AT5G67190 | 56.831 | 2.71e-58 | 180 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Lele52g0318 | AP2 | 1.7e-11 | CL0081 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele52g0318 | 52 | 1881378 | 1882013 | Lele52g0318 | 52 | 1881378 | 1882013 | ECH | |
Lele49g0294 | 49 | 1744225 | 1744788 | Lele52g0318 | 52 | 1881378 | 1882013 | hybridization | |
Lele50g0308 | 50 | 1806083 | 1806718 | Lele52g0318 | 52 | 1881378 | 1882013 | hybridization |