Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0316 ATGTGGGATCTGAATGACTCGCCCGATTGGAGAAAGGACGAGGAATCCGAAGGCTATTCTTCCTTGAAGACATCCATGGAAGGAGAAGAGGACAAAGGGAAAAGAGTCGGATCTATGTCGAATTCAAGCTCATCTGCGGTGGTTATCGAGGACGGATCAGAAGGAGAGGACGGTGGGAGGAGCAAAACGTTGAAGAAGAAAAGCAGCAAGATATTCGGGTTCTGCGTGACCCAGGACGAGTCCATGGATAGTGACCCACCCGTGACCCGGCAGCTTTTCCCGGTGGAGGAGGAGGAGGTGGCGGCCGCCATGTCATCGGGTGGAGGGAGCACGGCCTTCCCTCGGGCCCACTGGGTGGGCGTGAGATTCTGTCAGCCAGAAGCAGTCGGCGCCGGTGCCGGAGGAAAATCCGTGGAAGTATCGTCGCAGCCGATGAAAAAAAGTCGGCGAGGACCAAGGTCAAGGAGCTCTCAGTATAGGGGAGTAACCTTTTACAGAAGAACAGGTCGATGGGAGTCACATATATGGGACTGCGGAAAACAAGTGTATCTGGGTGGATTTGACACAGCACATGCTGCTGCTCGTGCATATGATAGAGCGGCCATTAAGTTCCGTGGGGTGGAAGCCGACATCAACTTCAACATTGAAGACTACGAAGAAGACTTGAAACAGATGAGCAATTTAACAAAGGAAGAGTTCGTGCACGTGCTTCGTCGACAAAGCACTGGGTTCCCCAGAGGAAGCTCCAAATATAGAGGCGTAACTTTGCACAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAATTTCTTGGCAAAAAGTACGTTTATCTTGGTTTGTTCGACACCGAGATTGAAGCTGCAAGGGCTTATGACAAAGCAGCAATAAAATGTAATGGCAAAGAGGCCGTCACCAACTTCGATCCCAGCATCTATGAGAATGAGCTCAATTCTGAATCCCCGGGTAACACTGCGAATCACAATCTGGATTTAAGCCTGGGCAATTCGAGCTCAAAGCAAGGCAATAATAGTCAAGCACTGGGGAATAATAATGATGGATCCGAATCAAGTTGGAGGAACAATAATGGAGGGTTAATGAGGCCAAAGTTGACAGTGCTGGAAGGAGGTCAAACTCAGTTTCAACAACCTGAAGCATCGAGAGAAATGCAAAGATTTGGCGGCGCCTACAGCAGGAATACATCTAGAGAGCCTCATCATCAAATGCTCAACAGTTTTGCTCCATCACAACATCTTCACCCACCACCAAGTTTTCATAATTATCCAAGCAGCAGCAACGAAGGGGGGCGTATAGGGAGTGATCTTTCATTGTCAATGAGCGATCATCATCATCATCCGCAATCGGGGCCTCCTCATCATCTTCATCAAGCTCATTATATTGCAACTGCTGCAGCATCATCAGGATTCCCAACGCAGATTAACAGGCTTTCCCAAGGATGGCTGCAGAAAAGTGGGTTCCACACGCTCATGAGACCCAACTGA 1497 0.4943 MWDLNDSPDWRKDEESEGYSSLKTSMEGEEDKGKRVGSMSNSSSSAVVIEDGSEGEDGGRSKTLKKKSSKIFGFCVTQDESMDSDPPVTRQLFPVEEEEVAAAMSSGGGSTAFPRAHWVGVRFCQPEAVGAGAGGKSVEVSSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENELNSESPGNTANHNLDLSLGNSSSKQGNNSQALGNNNDGSESSWRNNNGGLMRPKLTVLEGGQTQFQQPEASREMQRFGGAYSRNTSREPHHQMLNSFAPSQHLHPPPSFHNYPSSSNEGGRIGSDLSLSMSDHHHHPQSGPPHHLHQAHYIATAAASSGFPTQINRLSQGWLQKSGFHTLMRPN 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0316 498 SUPERFAMILY DNA-binding domain 249 309 IPR016177 GO:0003677
Lele52g0316 498 PRINTS Ethylene responsive element binding protein signature 289 309 IPR001471 GO:0003700|GO:0006355
Lele52g0316 498 PRINTS Ethylene responsive element binding protein signature 251 262 IPR001471 GO:0003700|GO:0006355
Lele52g0316 498 SUPERFAMILY DNA-binding domain 157 215 IPR016177 GO:0003677
Lele52g0316 498 MobiDBLite consensus disorder prediction 130 159 - -
Lele52g0316 498 SMART rav1_2 158 220 IPR001471 GO:0003700|GO:0006355
Lele52g0316 498 SMART rav1_2 250 313 IPR001471 GO:0003700|GO:0006355
Lele52g0316 498 MobiDBLite consensus disorder prediction 411 438 - -
Lele52g0316 498 MobiDBLite consensus disorder prediction 311 367 - -
Lele52g0316 498 Pfam AP2 domain 249 298 IPR001471 GO:0003700|GO:0006355
Lele52g0316 498 Pfam AP2 domain 158 206 IPR001471 GO:0003700|GO:0006355
Lele52g0316 498 FunFam AP2-like ethylene-responsive transcription factor 157 216 - -
Lele52g0316 498 CDD AP2 158 215 IPR001471 GO:0003700|GO:0006355
Lele52g0316 498 Gene3D AP2/ERF domain 249 308 IPR036955 GO:0003700|GO:0006355
Lele52g0316 498 Gene3D AP2/ERF domain 157 216 IPR036955 GO:0003700|GO:0006355
Lele52g0316 498 ProSiteProfiles AP2/ERF domain profile. 250 307 IPR001471 GO:0003700|GO:0006355
Lele52g0316 498 MobiDBLite consensus disorder prediction 411 459 - -
Lele52g0316 498 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 82 401 - -
Lele52g0316 498 MobiDBLite consensus disorder prediction 1 36 - -
Lele52g0316 498 MobiDBLite consensus disorder prediction 311 363 - -
Lele52g0316 498 MobiDBLite consensus disorder prediction 1 63 - -
Lele52g0316 498 ProSiteProfiles AP2/ERF domain profile. 158 214 IPR001471 GO:0003700|GO:0006355
Lele52g0316 498 CDD AP2 249 309 IPR001471 GO:0003700|GO:0006355
Lele52g0316 498 FunFam AP2-like ethylene-responsive transcription factor 249 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0316 Lele-ChrLele52 1863303 1865864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0316 1 497 AP2-EREBP Transcription Factor Family AT4G36920 53.668 7.70e-138 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele52g0316 AP2 3.4e-10 CL0081