Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0309 ATGGCAAGACAGATCCGAGTCGTCTCAACCAGCAACGTTCAAGCAGAGGCTCGAAACTGCGATCCGACTCGAAAGATTGAGTTGACTCCATGGGATCTTCAGATCCTCCTAGTGGACCCCATTCAGAAAGGCCTTCTTTTCCACAAACCCAGTGCTAACATGGATTCCGTAATCCACCACCTGAAAGCGTCCCTCTCATCCACCCTCGGTTTCTTCCCACCCCTCGCCGGCCGTCTCACCGTCGACGTACACGACGACGATACCTCATCCGTTTTCGTTCTCTGCAACAACTCCGGAGCATCATTTGTGCACGCTGTAGCAGATGATTTGACCATCTCAGATATCCTTCAACCCATCTACACTCCTCGCATCGTCCATTCCTTCTTCCCGCTTAACAGAGTAAGAAACTACGAAGGCACGAACAAGCCACTGCTAGGCGTGCAAGTCACTGAGCTAGGAGACGGCATTTTCATCGGCTGCACTATCAACCACGTCGTTGGGGACGGCACGTCGTTTTGGCATTTCTTCAATTCCTGGTCTGAAATCTCACGTGGTTCCAGCGAGTTATCCAAGCCTCCCACGCTCGAGCGTTGGTCTCTCGATGGCATCAATCGTCCTATACGCATTCGTTTCGACAAGACGAAGCAGAAGCAGGAGTTCTATGGGTACCTCGATTCGCAGTTGCAGCAAGAGAGGGTGTTTCACTTCTCAAGTGAAAAAGTGGCAGAACTGAAAGCCAAAGCTAACGCGATGGTAAATTCCAATAAGATATCTTCTCTGCAAGCAACTTTGACCCATCTTTGGCGCGCCATAGTTCGGAACCAAGGTACTGTTGACCCAGAAGAAGAGGTCAACTACAGATTGCTGATAGGTATAAGGCCGAGGATACGTCCTCCATTGCCTCAGAACTATTTTGGAAACGCGGTGCAGGATGGTACCGTGAGCATCAAAGCAGGGGAACTGCTAGCTCAAGAGGGTCTCGGTAAGGCTGCTCTGGATATGAACAGGATGGTTGCTTTGCACACCGAAGAGAAGCTGGTGAGCCACGTCAAGTCTTGGATGAAAAACCCTAGGCTGCTTACAGAGGATGGGATGGCTAGGAATGCATTGGTTACCAGTAGTTCGCCGAGGTTTGATGTGTATGGTAATGACTTTGGATGGGGAAAGCCGGTGGCTGTCCGAAGCGGTGCCGGGAACAAGACCTATGGGAAAATTACAGTTTTTGCCGGAGCAGAGAGTGGCAGCATTGATGTGGAAGTTTCCCTTTCTTATGAAATTTTGGAGGCCATGGCAAAGGACTCTGAGTTCATGGATGCTGTCTCCGTTGCTTCTCCTATGATTAATTAA 1347 0.5004 MARQIRVVSTSNVQAEARNCDPTRKIELTPWDLQILLVDPIQKGLLFHKPSANMDSVIHHLKASLSSTLGFFPPLAGRLTVDVHDDDTSSVFVLCNNSGASFVHAVADDLTISDILQPIYTPRIVHSFFPLNRVRNYEGTNKPLLGVQVTELGDGIFIGCTINHVVGDGTSFWHFFNSWSEISRGSSELSKPPTLERWSLDGINRPIRIRFDKTKQKQEFYGYLDSQLQQERVFHFSSEKVAELKAKANAMVNSNKISSLQATLTHLWRAIVRNQGTVDPEEEVNYRLLIGIRPRIRPPLPQNYFGNAVQDGTVSIKAGELLAQEGLGKAALDMNRMVALHTEEKLVSHVKSWMKNPRLLTEDGMARNALVTSSSPRFDVYGNDFGWGKPVAVRSGAGNKTYGKITVFAGAESGSIDVEVSLSYEILEAMAKDSEFMDAVSVASPMIN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0309 448 Gene3D - 2 218 IPR023213 -
Lele52g0309 448 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 437 - -
Lele52g0309 448 Gene3D - 229 436 IPR023213 -
Lele52g0309 448 Pfam Transferase family 22 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0309 Lele-ChrLele52 1821765 1823111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0309 61 432 Monolignol Biosynthesis Gene Families AT5G48930 27.708 1.44e-27 112