Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0308 ATGGCTTCTGCTAATATGGGATTCGGGGCTACCGATGACTCCTCGATGGCACAAGGCTCAGTTGCTTCTAAGGATGTTTTATCGGTTATTGATTCGTTAAAAGAACATATATCTGCTGAGCGGCGTGTTTCCATTAAGAAAAGAATGGAAGACAATAGACGGAAGCTGATTGGCGTCACAAATCATATTTATAAATCATCAACGGGAAGAAGAATCTGTGGCATTACTGATGCTAATGGAAGTCCAGACCTACTGACGAAGAGGCAAAAAGATGCAATCGATATGCGCAACGATATTCATGCAAGTAATGGTGACAAGGAGAGCAACGGTCCCCAGGAAGAGCGCCATTTTTCTACAGCAGTCCTTCTAGGATCTAACGTTGCTGTAAAGAATGCTGTTCGCCCTATCAAGCTGCCAGAGGCAAAAAGATTACCTCCTTATACTACGTGGATTTTTCTGGATAGAAATCAAAGAATGACTGAGGATCAGTCTGTAGTAGGTCGAAGGAGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGACAGCGAGGAGGAAATAATTGAGGAAGAAGAGGAAAAAAGAGATTTTGTGGAATTTGAAGATTATATACTTCGCATGACTATCAAAGAATTTGGTTTGTCTGATCTTGTTCTGGAGTCTCTGGCTCAGTGTTTCTCTAGAAACACTTGTGAACTTAAGGCAAGATATGAAGTTATCAGTAATGAAGAAAACATTGGTGGGGTTTCTAAGAGTGGCGGTACTGAAGAGAATTCACTAAATGGAAATTCTTTTCTGGAAAAAGATCTTGAAGCAGCTCTTGATTCTTTTGACAACCTTTTCTGCCGAAGATGTCTTGTTTTCGATTGCAGATTGCATGGATGTTCTCAGGATCTTGTCTTTCCTGCTGAGAAACAACACGTGTGGATCCCTCCAAATGCTGAAAATACTCCATGTGGTTCAAATTGTTTTCAATCGGTACTCAAGCCACAAAGATTTGCCAGATTGACCTCTTCTGCCCGGGGAGATGTTGAGGAGAAAAGCTCAGGTGGTGCTGGGGTGCATATACCATATAGGAAGAAGTCTTGTGGTCCGTCTGCTAGAAGGCAGGTAAAGGGCGGCCAAAGTGAAAGTGCTTCATCCAATGCGAAGAACATATCTGAAAGTAGTGACTCAGAGAATGGTCCTGGACAGGAAACTGTTTCAGCCTCCCACTCAGCATCTCCTAAAACTAGAACTCTGGGGAAAGGTGAAGTAGGTAAAAGGAACAGTAAGCGTGTGGCAGAATGTGTGCTAGTTTGCTTGCAGAAGAGGCAGAAGAAAACACTGGTTTCAGATTCTGGTTCCATTGGTGAAGCTCCTGATCGTTCATCAGATGAGATGGCTTTTGACCCACTTAATAGTGATGACATCTTGAGGAAGGAAGAATTCTTTGATGAGAATGTATGCACACAACAATCTGCTGACAATAAGGCGTGGAAACCTCTTGAAAAGGGGCTTCTGGAGAAAGGAGTTGAAATTTTTGGCAGAAACAGCTGTTTAATTTCCAGGAATCTCTTAAATGGTCTAAAGACGTGTTGGGAGGTTTTCCAATACATTAATTGCAATGAGGAAAAGGTGTCAGGATCTTCTGGTGATTCTGAATTTTCCCTCATGGAAGGCTATTCCAAGGGTAATAATGAAGTAAGACGAAGATCAAGGTTTTTACGTAGAAGGGGAAGAGTTCGGCGCTTAAAGTATACCTGGAAGTCTGCCGCCTACCATTCAATCAGAAAAAGGATCACAGAGAGAAAGGATCAGCCCTGCCGGCAGTATAATCCATGTGGTTGTCAATCAGCTTGTGGAAAGCAGTGCCCTTGTCTTCAAAACGGAACCTGCTGTGAGAAATACTGCGGATGCCCGAAGAGTTGTAAGAATCGATTTCGTGGCTGTCATTGTGCAAAAAGTCAATGCCGAAGTCGTCAATGTCCATGCTTTGCAGCAGATAGGGAATGTGATCCAGATGTTTGTAGAAATTGTTGGGTCAGTTGCGGTGATGGTACCCTAGGGATTCCCAGCCAAAGGGGTGATAATTATGAATGTAGAAATATGAAGCTGCTTCTCAAACAGCAGCACAGGGTTCTTCTTGGAAGGTCTGACATATCTGGTTGGGGAGCTTTCTTAAAGAATAGTGTTGGAAAGCATGAATACCTTGGCGAGTATACTGGAGAGTTGATTTCACATCGAGAAGCAGATAAGCGGGGAAAGATATACGATCGCGAGAATTCATCTTTTCTCTTTAATCTAAATGATCAGTTTGTTCTGGATGCTTATCGAAAGGGTGATAAATTGAAGTTTGCCAACCATTCTCCTGATCCGAATTGTTATGCCAAGGTTATTATGGTTGCTGGAGATCACAGAGTAGGGATTTTTGCCAAGGAAAGTATCAGGGCTGGGGAGGAACTTTTTTATGATTATCGCTATGAGCCAGATAGAGCTCCAGCTTGGGCTCGGAAGCCCGAGGCATCTGGGTCCAGAAAAGATGACGGCGCTCCTTCAAGCGGTCGAGCGAAGAAGCTTGCTTAA 2574 0.4305 MASANMGFGATDDSSMAQGSVASKDVLSVIDSLKEHISAERRVSIKKRMEDNRRKLIGVTNHIYKSSTGRRICGITDANGSPDLLTKRQKDAIDMRNDIHASNGDKESNGPQEERHFSTAVLLGSNVAVKNAVRPIKLPEAKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIEEEEEKRDFVEFEDYILRMTIKEFGLSDLVLESLAQCFSRNTCELKARYEVISNEENIGGVSKSGGTEENSLNGNSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQHVWIPPNAENTPCGSNCFQSVLKPQRFARLTSSARGDVEEKSSGGAGVHIPYRKKSCGPSARRQVKGGQSESASSNAKNISESSDSENGPGQETVSASHSASPKTRTLGKGEVGKRNSKRVAECVLVCLQKRQKKTLVSDSGSIGEAPDRSSDEMAFDPLNSDDILRKEEFFDENVCTQQSADNKAWKPLEKGLLEKGVEIFGRNSCLISRNLLNGLKTCWEVFQYINCNEEKVSGSSGDSEFSLMEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQHRVLLGRSDISGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKESIRAGEELFYDYRYEPDRAPAWARKPEASGSRKDDGAPSSGRAKKLA 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0308 857 Gene3D SET domain 608 825 IPR046341 -
Lele52g0308 857 MobiDBLite consensus disorder prediction 372 414 - -
Lele52g0308 857 Pfam SET domain 719 822 IPR001214 GO:0005515
Lele52g0308 857 MobiDBLite consensus disorder prediction 341 423 - -
Lele52g0308 857 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 22 855 IPR045318 GO:0006338|GO:0018024
Lele52g0308 857 SMART CXC_2 642 679 IPR033467 -
Lele52g0308 857 ProSiteProfiles SET domain profile. 708 823 IPR001214 GO:0005515
Lele52g0308 857 Pfam CXC domain 646 677 IPR041355 -
Lele52g0308 857 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 12 857 IPR025778 GO:0031519
Lele52g0308 857 MobiDBLite consensus disorder prediction 831 850 - -
Lele52g0308 857 SUPERFAMILY SET domain 582 828 IPR046341 -
Lele52g0308 857 ProSiteProfiles CXC domain profile. 594 693 IPR026489 -
Lele52g0308 857 CDD SET_EZH 708 824 - -
Lele52g0308 857 MobiDBLite consensus disorder prediction 831 857 - -
Lele52g0308 857 SMART set_7 708 829 IPR001214 GO:0005515
Lele52g0308 857 FunFam Putative histone-lysine N-methyltransferase EZH2 608 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0308 Lele-ChrLele52 1812195 1819129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0308 697 826 C2H2 Transcription Factor Family AT2G23740 27.211 1.71e-09 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele52g0308 SET 6.9e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0308 52 1812195 1819129 Lele53g0139 53 1110280 1115550 CCT
Lele52g0308 52 1812195 1819129 Lele54g0139 54 1176657 1180197 CCT
Lele52g0308 52 1812195 1819129 Lele55g1350 55 19923447 19926956 CCT
Lele52g0308 52 1812195 1819129 Lele56g1296 56 16222548 16226190 CCT
Lele52g0308 52 1812195 1819129 Lele52g0308 52 1812195 1819129 ECH
Lele49g0286 49 1692861 1697046 Lele52g0308 52 1812195 1819129 hybridization
Lele50g0299 50 1744524 1751336 Lele52g0308 52 1812195 1819129 hybridization