Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0301 ATGCTTGATCCTTCCTCTCCCGCCATGAACGACCAGCTCTCCAGGCCCACCTCAATCTTCGGACTCCGCTTGTGGGTCGTGCTCGGGGTTTGTGTCGGAGCCGCCATCGTGCTGCTTCTCTTCCTCATTTCAATCTGGCTCGCTTCCAAGCGCTCCAAGACTAACCCCTCTCACAGACCATCCATCCCGCCCGTCTCCAAAGAGATCCACGAGATTAGAATCGACCACCACCACGATTCCAAGCCGAAAGGGACCCGTATCCTATCCAACCCGTCTCCCGAACTCGACCCACTTCCTGGAATTGAGCGCCAGGCCCTGCTCCCGACTTCGGAAGAAGAAAACCCGTCGGGGATCAACAGAATTCAATTTGAGATTGGGAAGAATCACAGAATTTCGTTCCCCGAACGTGCTCTGGCTCGGTCGTCTTCACACGGAAGTGGGGAGGTACGGCCCGTCGATCAGGTGCCTACGGTGATTCCTGAAGTATCCCATTTGGGCTGGGGCCACTGGTATACTCTGAGAGAGCTTGAGGATGCGACGAGTGGGTTCGCCGACGAGAACGTCATCGGGGAAGGCGGCTACGGAATTGTTTACCATGGTATTCTGAAGGACAATACTAATGTTGCTGTTAAGAATTTGCTCAATAATAGGGGACAAGCTGAGAAAGAGTTTAAGGTCGAAGTGGAAGCTATAGGACGAGTCCGACACAAGAATTTAGTAAGGTTGCTGGGATATTGTGCTGAAGGAGCTCATAGAATGCTCGTATATGAGTACGTTGACAATGGGAACTTAGAGCAGTGGCTGCATGGGGATGTCGGGTTTTGCAGTCCTCTGACTTGGGAAATTCGAATGAACATTATTCTGGGAACAGCAAAAGGGTTAGCCTATCTTCACGAGGGGTTGGAACCAAAAGTTGTTCACCGTGATATCAAATCAAGCAACATCCTGATCGACAAGCAATGGAATTCAAAGGTGTCAGACTTTGGGCTTGCCAAACTCCTTGGCTCTGAGAGCAGCTACATTACAACACGTGTGATGGGCACATTTGGATATGTTGCTCCCGAATATGCAAGTACTGGAATGTTAAATGAACGAAGTGATGTGTACAGTTTCGGAATTCTTATTATGGAAATAATTACAGGCAGGAATCCAGTTGATTATAGTCGGCCTCCAGAAGAGGTGAATTTAGTTGACTGGCTCAAGAAGATGGTTAGCAACAGGAATGCAGATGGAGTGTTGGATCCCAAGCTCCCTGAGAAACCAAGTTCAAGGGCACTCAAGCGAGCCCTTCTTGTGGCTTTACGTTGCACTGACCCCAATGCACAAAAACGACCTAAAATGGGGCATATCATACACATGCTTGAAGCTGAGGATTCTCCCCACAAAGAGGATCGGAGGGCAAAAAGGGATGCGGGAAATTCAGCCAATGATGAGGATAAATTAAAAGAGGAGGCAACTGTGTCTGGTGATGATGGTAAAGTTTAA 1485 0.4896 MLDPSSPAMNDQLSRPTSIFGLRLWVVLGVCVGAAIVLLLFLISIWLASKRSKTNPSHRPSIPPVSKEIHEIRIDHHHDSKPKGTRILSNPSPELDPLPGIERQALLPTSEEENPSGINRIQFEIGKNHRISFPERALARSSSHGSGEVRPVDQVPTVIPEVSHLGWGHWYTLRELEDATSGFADENVIGEGGYGIVYHGILKDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGFCSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILIDKQWNSKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYSRPPEEVNLVDWLKKMVSNRNADGVLDPKLPEKPSSRALKRALLVALRCTDPNAQKRPKMGHIIHMLEAEDSPHKEDRRAKRDAGNSANDEDKLKEEATVSGDDGKV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0301 494 ProSitePatterns Protein kinases ATP-binding region signature. 189 211 IPR017441 GO:0005524
Lele52g0301 494 CDD STKc_IRAK 189 455 - -
Lele52g0301 494 SUPERFAMILY Protein kinase-like (PK-like) 159 455 IPR011009 -
Lele52g0301 494 SMART serkin_6 183 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0301 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Lele52g0301 494 MobiDBLite consensus disorder prediction 454 494 - -
Lele52g0301 494 ProSiteProfiles Protein kinase domain profile. 183 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0301 494 PANTHER OS01G0323000 PROTEIN 8 478 - -
Lele52g0301 494 Gene3D Phosphorylase Kinase; domain 1 162 258 - -
Lele52g0301 494 FunFam Putative receptor-like serine/threonine-protein kinase 259 469 - -
Lele52g0301 494 Pfam Protein kinase domain 184 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0301 494 Gene3D Transferase(Phosphotransferase) domain 1 259 481 - -
Lele52g0301 494 FunFam Probable serine/threonine-protein kinase At1g01540 163 258 - -
Lele52g0301 494 Coils Coil 203 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0301 Lele-ChrLele52 1779074 1781565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0301 164 455 Receptor kinase-like Gene Family AT4G02010 45.270 1.24e-87 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele52g0301 Pkinase 7.3e-48 CL0016