Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0290 ATGACAGGATGGATCACTTTTAAGGGGAATTACTTGCTTAGGAATGTATCAGAAACTGAGTTGCATATGAGATATATCGACTCAGTAAACCCTGTGCAGCGTCATAATTTTTACCCATATCCTCTGACAAAAAGTGCAGTACTCGGTTCTTTGACGTATCTATTTAATTTAACGAGTGACTCGATTATAAATTTAGAGTTGGATAAGCTACTGGCGCCGGATGATAGGTTACCTCACTTGCTCCTAGTGGGGATTAGAATCTCATCCTTGAATACAGTCCTGAGTATACTCTCTGCTCATTATACATGTTTTCAAAAAGATATGGCCTGCCCACCGTCCAACAGTAAAAGTACCGAGTTGACGGCTTGCCGCAAGAAAACTGGGGAATCCACCATCGCTTATGAAATGATTGTGCGGAAGAGGGGGATACGACCTAGGTGCTTGATGTGTGAAGATCTCATATCTTTCAATAGCGCTTCTCTATCCAAAAGTTTTTACTGGATGTTTAGTAAAAAATACTTGACTGGTCTGAATCTACAATTCCGGACTGTCGTGCTTCTGTTGGTTCTTTGTTCCTCGTGCTTCTATGGATTCTTTTTTGATGTTGTCTTCCTGATTCACCTTCATGGTTCGGCTTCCTGCTTTTGTTATTGTGCCTCTGTTGGTTCCTGCCTTCCTGGTTCGTTGTACTTCTATAGATTCCTGCTTCTATGCGGTGTTCCTTGTTCGTGTTCACCCTTTGTCCATGTTTCAGCTTTCGTTGTTCTGATGGACAGTCTGGGTTCTTCTAGTCTTTTCCTGCGTGTTTGTCTTGCTTTCGCTCTGGTTGTTTGTTTCTTTGTGTTACTTGTTTCTTTTGGGTCCGGGTGGTTGACCCTGATACGACATGGTTGCCCTATGACCCAATGTTCATCGAGGGTCTGCAGGCCCACACTTCGTTTTTGGCCTGTTTTGTCTTGCCGTTCTCAAATGCCAGCTATGGCTGCTGCCTCAAGCATCCAGTTTTCCTTGGGGCCTAATTTAGGGCATAAGTCCTGCTTGCCAAAAGGAATGCCATCCTCAAACATTTCTGCTGCATCAAGCTTACATTTAACTGGGGATCAAAGTCTTGGTCTTATGTATCCCAGAATCCCCCTGCCATCCAGGGAAAAAAGGTTTAGTATGGTTCCCCGAGCATCAAAGGATGTCCCATATAGCTTCCGTTATCCAGCCATGACCAAAAAGCCAAGATGGTGGTGGAGGACTTTAGCATGCATCCCATACCTTATGCCTCTTCATGAGACATGGATGTATGCGGAGACAGCATACCATCTTCACCCCTTCCTTGAAAACTTTGAATTCATGACATACCCTTTCCTAATGGCAATTGGGAGTCTGCCGGGCTGGTTCCTCATGGCATACTTTTTTGTTGCATATCTTGGAATTGTGAGGAGAAAAGAGTGGCCTCACTTCTTCCGGTTCCATGTTGTGATGTGA 1476 0.4424 MTGWITFKGNYLLRNVSETELHMRYIDSVNPVQRHNFYPYPLTKSAVLGSLTYLFNLTSDSIINLELDKLLAPDDRLPHLLLVGIRISSLNTVLSILSAHYTCFQKDMACPPSNSKSTELTACRKKTGESTIAYEMIVRKRGIRPRCLMCEDLISFNSASLSKSFYWMFSKKYLTGLNLQFRTVVLLLVLCSSCFYGFFFDVVFLIHLHGSASCFCYCASVGSCLPGSLYFYRFLLLCGVPCSCSPFVHVSAFVVLMDSLGSSSLFLRVCLAFALVVCFFVLLVSFGSGWLTLIRHGCPMTQCSSRVCRPTLRFWPVLSCRSQMPAMAAASSIQFSLGPNLGHKSCLPKGMPSSNISAASSLHLTGDQSLGLMYPRIPLPSREKRFSMVPRASKDVPYSFRYPAMTKKPRWWWRTLACIPYLMPLHETWMYAETAYHLHPFLENFEFMTYPFLMAIGSLPGWFLMAYFFVAYLGIVRRKEWPHFFRFHVVM 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0290 491 Pfam Chloroplast import apparatus Tic20-like 384 491 IPR005691 -
Lele52g0290 491 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 330 491 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0290 Lele-ChrLele52 1719050 1724451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0290 375 491 Chloroplast and Mitochondria Gene Families AT4G03320 36.667 1.28e-20 90.1