Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0281 ATGGCAATTAATTGCATTCATAGACGATCATTAATATGTAAGGCAGGCAGCAATTCTTGTTTGTATTGTGTTGAGATGGTGGTGGCTCATGGAAAGAACCGAGTGTTAGACGATGAGTTGGCTAAGAAGGAGGTGGCGGACCACCCTCGTGCTTCTACGTCTGCCGGGAAAGCCGTTACTCCGCCGCGGCACGGTAAAAATACGGATGACGATGATGCCTTAACCCTGGCCAATTGGTCAAAGTCTCCCATACGCGTCTCTCCTTCAACTACGAACAAACGGAACAAGATGGTGCAGAATCAACACAGGCTCATGAACATTCAGAAAAAGCATTCGGATTCCATACCTAATCAAGGCCCATCCGATCAGGCACAAAAGCTTGCCAGCTCCTCCAAGGTGGCAACAGACAGGACATTATCAGAAGGAGAGGCCAGGTCGTCTGCTGTGTTTCGAGCAGAGATGATCCAATCAACGTTAGATCCGAGATTCCCTAGCTTTGTCAAGTCATTAGTCAGACCACATGTTGGTGGTTGTTTTTGGATGGGGCTCCCCGCGTTTTTCTGTAAAAGACACTTGCCGGATAATGACACTACGGTTACTTTGGAAGATGAATCCGGTAAAGAATCCCAGTTGAAATACATTGCTTGCAAAACAGGTCTGAGTGCTGGTTGGAGGCAGTTTTCTGCAGGCCACAAATTGCAGGAGGGAGATGTTTTGGTCTTCCAATTAGTTGAACCTTCTAAATTTAAGGTATATATAATAAGATTAAATGGCTTGAGCGAACTGGACGGGGCGGCTTCCCTTCCGAATCTGGATGATTATACAAAGCAAAAAGCAAAAGATAATGCAAATAAGGATGCTCTACTGAGTAATAGCCCAAAGAGGAAGCAAGAAAAATCTGACTCACCATCTCCAGTTGTCCAAAAGAAAAAGAAGACAAGTGTGTCGAGGTTTTCCCCAAAGGTTAGGCAGTGCGCAGAACAATGCGAATATGAAAGTGATGAAGCTGTTTCAGAGGTACTGGAGGGCCTTGTAACGGAGCTTAAATTCAAGTATGTAAAAGGTTTTGAAAATTTCAGTATCATAATTGATGGAATTCCAATAGATTCAGAGCTCCCCGAGGAGGTTCGAAGTAAGTATTACATACTCTGCCATAGCCAGCAGGCCTTTCTACACGAGAATCTCATCAAGGGCATAAACTATAACCTCGGTGTCGGTATTATATCTGAAGTTGTCAACATTTCTGATGCCTTGAAATCCAGCTCACTGCATATCTCAGCCGCTGAATTTGCTAAATGGGATAAAGAGTTGCTAGCCTTTGAGTATTTGGGCATGAATATGGAGTTTTTAAGACACCGGTTATGCAGGCTTGTAAACTTGGCGTATGAAACACAAGATGCCTCCGAGACTTCAAGGTACACGGCCACGGCGACGACGTCCACAACTGAATTCACTGGAGCAGATAACGAAATAATGAATATTGAAACAAAGCTTGAACAATTGAAAGAAGCTTGTGATGGTCTTGGTGCTTATATTGAGAGTTTGAAGTGCAAAGCTGAGTGCTTCCATCACTAG 1575 0.4406 MAINCIHRRSLICKAGSNSCLYCVEMVVAHGKNRVLDDELAKKEVADHPRASTSAGKAVTPPRHGKNTDDDDALTLANWSKSPIRVSPSTTNKRNKMVQNQHRLMNIQKKHSDSIPNQGPSDQAQKLASSSKVATDRTLSEGEARSSAVFRAEMIQSTLDPRFPSFVKSLVRPHVGGCFWMGLPAFFCKRHLPDNDTTVTLEDESGKESQLKYIACKTGLSAGWRQFSAGHKLQEGDVLVFQLVEPSKFKVYIIRLNGLSELDGAASLPNLDDYTKQKAKDNANKDALLSNSPKRKQEKSDSPSPVVQKKKKTSVSRFSPKVRQCAEQCEYESDEAVSEVLEGLVTELKFKYVKGFENFSIIIDGIPIDSELPEEVRSKYYILCHSQQAFLHENLIKGINYNLGVGIISEVVNISDALKSSSLHISAAEFAKWDKELLAFEYLGMNMEFLRHRLCRLVNLAYETQDASETSRYTATATTSTTEFTGADNEIMNIETKLEQLKEACDGLGAYIESLKCKAECFHH 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0281 524 MobiDBLite consensus disorder prediction 110 142 - -
Lele52g0281 524 CDD B3_DNA 164 255 IPR003340 GO:0003677
Lele52g0281 524 MobiDBLite consensus disorder prediction 110 145 - -
Lele52g0281 524 Pfam B3 DNA binding domain 166 255 IPR003340 GO:0003677
Lele52g0281 524 Coils Coil 484 504 - -
Lele52g0281 524 MobiDBLite consensus disorder prediction 282 315 - -
Lele52g0281 524 SUPERFAMILY DNA-binding pseudobarrel domain 159 257 IPR015300 -
Lele52g0281 524 Gene3D - 143 257 IPR015300 -
Lele52g0281 524 ProSiteProfiles B3 DNA-binding domain profile. 166 257 IPR003340 GO:0003677
Lele52g0281 524 SMART B3_2 166 257 IPR003340 GO:0003677
Lele52g0281 524 MobiDBLite consensus disorder prediction 44 74 - -
Lele52g0281 524 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 95 257 IPR044837 -
Lele52g0281 524 MobiDBLite consensus disorder prediction 291 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0281 Lele-ChrLele52 1674971 1679572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0281 136 285 B3 DNA Binding Superfamily AT3G19184 45.033 9.86e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele52g0281 B3 6.5e-16 CL0405