LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele52g0268	ATGTCATCATCGAATTCTCCGTGCGCTGCTTGCAAGTGTTTGAGGCGGAAATGCACGCAAGAATGCGTGTTCGCTCCGTACTTCCCACCGGACAATCCTCAGCGGTTCACTTATGTCCACAGGGTATTCGGGGCCAGCAATGTAGCAAAGCTTCTCAACGAGCTCAACGCCGCGCAGAGAGACGACGCCGTCAAGTCTCTGGCTTACGAAGCCGAGGCCCGTCTCCGGGACCCGGTTTATGGTTGTGTGGGTCTCATCTCCATCCTTCAGCACAGGCTGAGGCAGATCCAAGTTGAACTCAACAATGCCAAGAAGGAACTCGCCACGTATATTGGACCTCAGGCTCTTCAGGCGATGCCGCCTCCCACCATTCTAGCACCTTCCGGAATGATCCCACAACAACACCCGAACAACCCATATTCCTCCACTGCTGGTTATCCCTACAACAACATGCCACCGCCTGCTCCTATGACCAATATTCCGACCGGTGGCTCTTCTCATAGCGGCCAACTGGTGATTCGTGACCCTTCCCAACAGCATCAGATCTTGGACGCCCAGCAGTTGGCCGCCACCGTGGCGGCGAGAGAGCAGCAAGATATGTTTCGAGGTTATGAGCAGCAGCAACAGCAACAAGAGTTTCTGGGATTCAATAATCATATTTCTTCAACCGCTGCTCCCACAGAGATGTCTCCTTCCTTGGCTCTTGGCTCCTTCGACAGCCCTTACGGCGGCCAGATGCAACCGCCGCAAGCGGAACACCACCACCAGCTTCATGCTCAGCTAATGCTTTCCCCACAGCAGCCGCAACCACAGCAACAAAGCCAGCAGTCACAGCAACCCCACCAGCAGCAGCAACAGTCAGAAAGCGAGGAGGGGAGGAGTGGCATCTGCCTTTCTTGTTGA	903	0.5504	MSSSNSPCAACKCLRRKCTQECVFAPYFPPDNPQRFTYVHRVFGASNVAKLLNELNAAQRDDAVKSLAYEAEARLRDPVYGCVGLISILQHRLRQIQVELNNAKKELATYIGPQALQAMPPPTILAPSGMIPQQHPNNPYSSTAGYPYNNMPPPAPMTNIPTGGSSHSGQLVIRDPSQQHQILDAQQLAATVAAREQQDMFRGYEQQQQQQEFLGFNNHISSTAAPTEMSPSLALGSFDSPYGGQMQPPQAEHHHQLHAQLMLSPQQPQPQQQSQQSQQPHQQQQQSESEEGRSGICLSC	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele52g0268	300	Pfam	Lateral organ boundaries (LOB) domain	7	104	IPR004883	-
	Lele52g0268	300	ProSiteProfiles	LOB domain profile.	6	107	IPR004883	-
	Lele52g0268	300	MobiDBLite	consensus disorder prediction	260	294	-	-
	Lele52g0268	300	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	4	285	-	-
	Lele52g0268	300	Coils	Coil	86	106	-	-
	Lele52g0268	300	MobiDBLite	consensus disorder prediction	222	300	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele52g0268	Lele-ChrLele52	1568660	1569562	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele52g0268	1	225	AS2 family	AT5G66870	56.170	2.79e-73	226

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Lele52g0268		LOB	1e-40	No_clan