Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0264 ATGGATCCGTCGCCGATGACCTTGGGACCAGCCATGGACATGCCAATCATGCACGATAGCGACCGGTACGATTTCGTCCGAGATATTGGGTCCGGGAATTTTGCTGTCGCCAGGCTGATGAGAGATAAGCAAACCAAAGAGCTCGTCGCCGTGAAGTATATCGAACGCGGGGATAAGATAGATGAAAATGTGAAGAGGGAAATCATTAATCACAGGTCTTTGAGACACCCTAATATTGTTAGGTTCAAGGAGATCATTTTAACGCCTACTCATCTAGCTATTGTTATGGAATATGCATCTGGAGGAGAACTCTTTGAGCGAATCTGCAATGCAGGGCGCTTTCCTGAGGATGAGGCCCGTTTCTTCTTTCAACAACTCATTTCTGGGGTCAGTTATTGCCATGCGATGCAAGTATGTCATCGGGACCTGAAGCTGGAAAACACATTATTAGATGGAAGCCCAGCACCTCGTTTGAAGATATGTGATTTTGGTTACTCCAAGTCATCGGTGCTTCATTCACAACCGAAGTCAACTGTGGGAACTCCTGCATATATTGCTCCAGAAGTATTGCTGAGGCAAGAGTATGATGGCAAGATTGCAGATGTCTGGTCTTGTGGAGTGACCTTATATGTGATGCTAGTGGGATCATATCCTTTTGAAGATCCTAATGAACCAAAGGATTTTCGAAAGACTATACAGAGAATTTTGAGTGTCCAGTATTTCATTCCAGACTTCGTCCAAATATCACCTGAGTGCCGTGACCTTATCTCTAGGATATTTGTTTTTGATCCTGCAGAGAGAATCACCATTCCTGAAATCTTGAACCACGAATGGTTTTTGAAGAATCTCCCCGCAGACCTAATGGATGAGAAGATACTGGGCAACCAATTTGAAGAGTCAGACCAACCAATGCAAAGCATGGACGTGATCATGCAGATAATTTCAGAAGCTACTATACCACCAGCTGGGTCCTGTTCTTTGGATCAGTTTATGGCAGACTTTGACGGAGACGATGGCATGGATGAATTAGAGTCGGACTCTGAGCTTGATATTGACAGTAGTGGGGAGATAGTGTATGCCATTTGA 1086 0.4448 MDPSPMTLGPAMDMPIMHDSDRYDFVRDIGSGNFAVARLMRDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEIILTPTHLAIVMEYASGGELFERICNAGRFPEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGSYPFEDPNEPKDFRKTIQRILSVQYFIPDFVQISPECRDLISRIFVFDPAERITIPEILNHEWFLKNLPADLMDEKILGNQFEESDQPMQSMDVIMQIISEATIPPAGSCSLDQFMADFDGDDGMDELESDSELDIDSSGEIVYAI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0264 361 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Lele52g0264 361 Gene3D Transferase(Phosphotransferase) domain 1 99 286 - -
Lele52g0264 361 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
Lele52g0264 361 SUPERFAMILY Protein kinase-like (PK-like) 14 321 IPR011009 -
Lele52g0264 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Lele52g0264 361 PANTHER SERINE/THREONINE KINASE 22 301 - -
Lele52g0264 361 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0264 361 FunFam Serine/threonine-protein kinase SRK2E 99 287 - -
Lele52g0264 361 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Lele52g0264 361 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele52g0264 361 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0264 Lele-ChrLele52 1531594 1535238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0264 22 283 CBL-interacting serine-threonine protein kinases AT5G25110 43.796 2.97e-66 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele52g0264 Pkinase 3.2e-71 CL0016