Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0259 ATGGAGAAATGTCGGCTCAAGGCGCCCTTTTCCTGCTATCCCAAGGGGCCAAGAAGTATCCAAGAAGCTACAGCAAATCAGGCTGTGATTTTGCGCACTGGGGAAGTCATGGCAGAAATGGTTATAGAACTTGTACTTGGCGAACTGCTGAGCAAGGTTTTGGAGGCGAAGGACAGGGCAATTCAATTCAGACCCACCCTTGAACGCCTAGCTAGCACACTCACGTCAATAAAACCAGTGATCGAACAGATAAAACAATACAACAGGCAACTAGATCGGTCGGAGGATGAAACAAAGAAGTTAATTGAAGATGTGAAGAATGGCGAGAAGCTTGTTCTCAAGTGCTCAAAACTCCGGTGGTGGGAATGCTGCTATAAACCCCAATACCAGGAGCAACTTGAAGATTTGGATCAGTCACTCGTGAGGTTCTTTCAAGTTGATATGCAAGTTCAGACGGCGAGGGATGCGAAGGAGACGCTGATAGAGGTGAAAGATATTCGTATGGAGATTAAGAAACTGAATGCGGTTGCGAGACATGAGAGGGGCCTGTGCTCAGCTCCCGTGCCGCCTGCATTCACTGTTGGATTGGATGTTCATGTTAGGGAATTGAAGGTACGGCTTCTCCAGGATGATGTTTCAGTGATAGTGGTCACCGGCTCGCCAGGTTCTGGGAAGACCACTTTGGCCAAAAAGTTGTGTTGGGATGCTAATGTCAGAGGTAAATTCAAGGACAATATCTTCTTTGTCAAGTTCTCGGAGACGCCAAATTTGAACGTCATTGTACAGCAACTTTATCAACACAATGGTCGCTCAGTGTCCGAGCCTCAAAATGATGAAGAAGCGATTGACCAGTTGAAACTTTTGCTAAAGCAAATTGGGGAAAATCCTATACTGTTGGTTCTGGACGATGTTTGGGATAGATCAGAATCTCTTGTTGACAATTTTCTGATGCAGCTGCCAGACTTTAAGATTTTAGTGACTTCCAGATTTGCAATTCGAAGATTCGGCACCCCACATTCCTTGAAACCCCTTGATGATGAGGATGCTGTGAAGCTTTTCCGCCACTCAGCACAACTGAAGAAGAGCAGCTCTGATATTCCTGATCATATTGTGAGAGAGATAGTCCAAGGCTGCAGTGGTTCTCCAATGGTACTAAATGCGATTGGCAGGTCACTCTGTGGGCAGCATTCTGTGGTATGGCAAAGCAGGGCAACGGAATTGTCTAAGGGTCGTCCGATTTTTGAATCTAATGAGGATCTGCTTGATTTTCTCCAAAAAAGCTTCGATGTCTTAGATACTAAGTCAGTCATTAAGGAGCGTTTCATGGACCTAGGTTTATTTCCTGAAGACCAGAAGATTCCTGCAGCTTCTCTTGTTGATATGTGGGTGGAACTGCATGGAGAAGATGACATAATTGCAATGGAGAAAATTTATGAACTGGCCACGCGTAACATGGTTGATATTGTCATAAGGAAATTTGCAAGTGGCACATGGAACTTCAATAGCCACTTTGTCCTGTGTCATGATCTTTTTCGGGAGCTAGCTATCCATCGAAGGCAAATTAGCCAGGAGCCACTGGAAAAGAGGAAAAGACTGATTATTAACATAACTGGAAACGAACTTCCCCAGTGGTGGACTGAACAAAAAGAGTATCATATAGCCGCCCGCGTCTTATCCATATCAACTGATGAATTATTCTCTTCTGATTGGTGCAACTTGGTACCAACTGAAGTTGAGGCTCTAGTTTTGAACCTTCGAGGGAAGAAGTACACCATACCAAGGTTCATAGAGAAAATGAGTAAGCTAAAAGTTATTTTAATCACAAATTATGGTTTCCACCCTGCTGCTGAGTTAGAGAATTTAGAACTTCTTAATTTGTTGCCCAATCTTAAAAGAATTAGACTGGAGCGTGTATTAATTCCTTCCCTCATTGAGAAAGGAGTGCAGTTGAAGAATCTTCAGAAACTATCTCTGTTTATGTGCAACGTAAATGAAGCTTTCAAAAATCTTTCCATCCAAGTTTCAGATATGATGCCAAACTTGGTGGAACTGAACATTGACTACTGCAATATGGTGGAATTGCCAGTTGGGTTGTGTGGTATTGTCTTCCTAAAGAAGTTGAGTATTACCAGTTGCCACAAGCTTTCTGCACTTCCTGAAGAAATTGAGAAGTTGGTCAATTTGGAATTGCTAAGGGTTAGTTCTTGTTCTGATTTAGCAGAGTTTCCGGACTCAGTTTCCAGCCTTAAAAAGCTTGAATTTCTTGATATCTCTTACTGCGTAAGCCTTAGTAGATTGCCAGATCATATGGGTGAGTTACTTAATTTGAAAGAGCTCTACATCACACGTTGCTTGAGATTATGGGAGTTGCCATCCACAATCATTAACCTTACGGGCCTAAGAGTTGTGGTGTGTGACGAAGAGATGGCTAATTTATGGGAATCTTGCAAAACCATCCTTACTGATCTACACGTAGAGGTGCCCCAAGCTGATGTAGGCCTAGAATGGCTTTGA 2514 0.4312 MEKCRLKAPFSCYPKGPRSIQEATANQAVILRTGEVMAEMVIELVLGELLSKVLEAKDRAIQFRPTLERLASTLTSIKPVIEQIKQYNRQLDRSEDETKKLIEDVKNGEKLVLKCSKLRWWECCYKPQYQEQLEDLDQSLVRFFQVDMQVQTARDAKETLIEVKDIRMEIKKLNAVARHERGLCSAPVPPAFTVGLDVHVRELKVRLLQDDVSVIVVTGSPGSGKTTLAKKLCWDANVRGKFKDNIFFVKFSETPNLNVIVQQLYQHNGRSVSEPQNDEEAIDQLKLLLKQIGENPILLVLDDVWDRSESLVDNFLMQLPDFKILVTSRFAIRRFGTPHSLKPLDDEDAVKLFRHSAQLKKSSSDIPDHIVREIVQGCSGSPMVLNAIGRSLCGQHSVVWQSRATELSKGRPIFESNEDLLDFLQKSFDVLDTKSVIKERFMDLGLFPEDQKIPAASLVDMWVELHGEDDIIAMEKIYELATRNMVDIVIRKFASGTWNFNSHFVLCHDLFRELAIHRRQISQEPLEKRKRLIINITGNELPQWWTEQKEYHIAARVLSISTDELFSSDWCNLVPTEVEALVLNLRGKKYTIPRFIEKMSKLKVILITNYGFHPAAELENLELLNLLPNLKRIRLERVLIPSLIEKGVQLKNLQKLSLFMCNVNEAFKNLSIQVSDMMPNLVELNIDYCNMVELPVGLCGIVFLKKLSITSCHKLSALPEEIEKLVNLELLRVSSCSDLAEFPDSVSSLKKLEFLDISYCVSLSRLPDHMGELLNLKELYITRCLRLWELPSTIINLTGLRVVVCDEEMANLWESCKTILTDLHVEVPQADVGLEWL 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0259 837 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 35 837 IPR039203 GO:0050832
Lele52g0259 837 Coils Coil 77 104 - -
Lele52g0259 837 ProSiteProfiles RPW8 domain profile. 31 182 IPR008808 -
Lele52g0259 837 Pfam NB-ARC domain 199 402 IPR002182 GO:0043531
Lele52g0259 837 Gene3D - 174 336 IPR027417 -
Lele52g0259 837 Gene3D Ribonuclease Inhibitor 542 822 IPR032675 -
Lele52g0259 837 SMART AAA_5 211 363 IPR003593 -
Lele52g0259 837 PRINTS Disease resistance protein signature 747 763 - -
Lele52g0259 837 PRINTS Disease resistance protein signature 378 392 - -
Lele52g0259 837 PRINTS Disease resistance protein signature 214 229 - -
Lele52g0259 837 PRINTS Disease resistance protein signature 291 305 - -
Lele52g0259 837 SUPERFAMILY RNI-like 590 803 - -
Lele52g0259 837 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 35 171 IPR008808 -
Lele52g0259 837 CDD AAA 200 337 - -
Lele52g0259 837 Gene3D - 343 427 IPR042197 -
Lele52g0259 837 Gene3D - 428 518 IPR036388 -
Lele52g0259 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 442 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0259 Lele-ChrLele52 1511041 1514713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0259 183 800 WRKY Transcription Factor Family AT4G12020 23.769 4.02e-12 68.6