Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0246 ATGTCATTTTCTCTGTTCTCGACGCCACAGCAACAACCGCTGTTTCAGCCCCCGCAGCAGCAACAGCAGAGCAGTTTGTTCCTTCCACAGCAGCAGCAGCAACAAGCCCAATTGCAACTTCAACAGCAGCCGCAGTCGCAGCCGCAGCAACAGCAGCTGCAACTGTTTCTGTTCACTACCGATAAAACTCCCGCTAATTATAGTACCAAGTGGGCAGATCTTCATCCTGATTCCCAGAAGGTTCTCCTTCAGATCGAGGAGCGGATATTGGAGTATAGGGATGAGAGCCAGAGACTGGATCAGTGTGGTCGTCTCTATGATTCTTCAATTTCAAATGAAGGGTTTGAGCTTGATGCAAGCCACATCGTTCAGGAACTGGGAGGAATCAGCACTGCCATGGAACGACAGAAAACTTTGTTGCAGGAATTGATGTTTGTTGTTAAAGATATGTTACGCAACACAGAGGTTGCTATTCGTTCTTTTATGATGTTACGTCCAAGGTTCCTTCATCCTAGTGGAGGGGGTGCTTCAAGTGCCACAGCCCCTTTGCAGACTCCTGGAACCACTGTAACACCTAGTTCAAGTAGTCAACCAATAACTACAACGATAGTGCCTGTTTTTGATTTTTATTATGGGCTTCCAAAGAAACCCTCACCCTTTTTGCAGCAATCAGTCTTAAGATTTGAGAAGCATCTGGGTGAATGCCGTCAATGGATTGAAGAGTTGGAACAGCTTCTTCTTTTAGACTCTGAGAAGAACGGTTCTAATAGTAGATCCTCATTATTGCAATCTCTTCCCAAAGTCCTGACAAATGTGCATGACTTTTTTGTTCACGTGGCTGCAAAGGCGGAAAGTATTCATCAGTACATTGAATCTATGAAATCAGCTTACCTAGCTGATCAGCGCCGTTGGGGGGAGGTGAATGATCCATTTTTAGAGGCTGATCGGCGAGAAACAGCAAGACAAGAAGCTGCCTCAAAACGAGTTCATCCAACACTACACTTGCCTGCAAATTCACAACCATCAACACAAGTTGCTGGGTTGTTTTCCAGCTCAGGAACTCAAGGGACGTTGACTGCCTCACAGACATCTGCAGCAACCACGTCATCTTCATCACGAAGTGGCCTTTCACTCTTTAGCACACCATCATCTGTTCCGCCTTCCTCTACACCATCTTTGTTTACAATACCAACTTCTGCTCCAACATCCTCTTTGTTTGGTTCGTCTAGTGCTACACCCCAAGCTTCAGCGTTTGGTTCTTCATCTCCCTTATTTGCTCCTTCTTCCACTCCCTCTCTTTTCAGTAATTCTGCTTCACCATTTGGTACGAGTACTGGAGGTTCACTCTTTTCGACTCCATTTGCTTCAGGTGCCGCAACAGGATCAGGGGCAAGCTTTGGGGCCGCATCAAAATCATCAAGGCCAAAATCCAGAACTGCTCGACGATAA 1449 0.4624 MSFSLFSTPQQQPLFQPPQQQQQSSLFLPQQQQQQAQLQLQQQPQSQPQQQQLQLFLFTTDKTPANYSTKWADLHPDSQKVLLQIEERILEYRDESQRLDQCGRLYDSSISNEGFELDASHIVQELGGISTAMERQKTLLQELMFVVKDMLRNTEVAIRSFMMLRPRFLHPSGGGASSATAPLQTPGTTVTPSSSSQPITTTIVPVFDFYYGLPKKPSPFLQQSVLRFEKHLGECRQWIEELEQLLLLDSEKNGSNSRSSLLQSLPKVLTNVHDFFVHVAAKAESIHQYIESMKSAYLADQRRWGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGTLTASQTSAATTSSSSRSGLSLFSTPSSVPPSSTPSLFTIPTSAPTSSLFGSSSATPQASAFGSSSPLFAPSSTPSLFSNSASPFGTSTGGSLFSTPFASGAATGSGASFGAASKSSRPKSRTARR 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0246 482 MobiDBLite consensus disorder prediction 1 29 - -
Lele52g0246 482 MobiDBLite consensus disorder prediction 458 474 - -
Lele52g0246 482 Gene3D - 216 306 - -
Lele52g0246 482 MobiDBLite consensus disorder prediction 177 197 - -
Lele52g0246 482 MobiDBLite consensus disorder prediction 458 482 - -
Lele52g0246 482 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 4 470 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Lele52g0246 482 MobiDBLite consensus disorder prediction 175 197 - -
Lele52g0246 482 MobiDBLite consensus disorder prediction 316 396 - -
Lele52g0246 482 MobiDBLite consensus disorder prediction 333 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0246 Lele-ChrLele52 1456029 1459210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0246 55 482 NAC Transcription Factor Family AT4G37130 64.368 0.0 521