Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0245 ATGTTGCTGACCTACCACATGAACACCTGTTTTGAAGAGGAAGTTGTTAAGCAGGAATTGAAGGCCATGGCGTGGAAGAAATCTGATTACAAGACTGTGATTATGTTTCTAGTTCTAGTCGTGAATGTGGGCTATCATGGAGATGCGGTCAAGAATGGGAGTTTAGGAGCTTCTTTCATATTTGGGGACTCATTGGTGGACGCTGGAAACAACAACTATCTGTCAACGCTGTCAAGGGCAAACATGACACCCAACGGAATTGATTTTAAGGCCTCCGGAGGAAACCCCACCGGCCGCTTTACCAACGGACGAACCATTGCTGATATTGTTGGAGAGAAACTGGGGCAACCAAATTATGCTGTGCCGTTCCTGGCCCCAAATGCAACTGGCAAAGCTATACTATACGGAGTGAATTACGCTTCTGGAGGAGGAGGCATTCTGAATGATACAGGAAGAATATTTGTGAATAGGCTGGGAATGGATGTTCAGGTAGACTACTTCAACATAACAAGGAAAGAGATAGATAAGGTGCTGGGGAAATTAAGGGCGAGGGAGTTCATAATGAAGGAATCCATGTTCTCCATCACGGTGGGTTCAAATGATTTTCTCAACAATTATCTTCTCCCTTTGGTCTCCATTGGAGCAAGAATTTCTGAAAGCCCAGATGCTTTCGTCGACGATATGATTAATCACTTCAGAACCCAACTCACTAGACTTTACCGGCTTGATGCTCGGAGATTTGTGGTGGCCAACGTTGGTCCGATAGGGTGCATACCTTACCAGAAGACCATAAATCGGCTGGATGAAAATGAGTGCACGGATTTGGCAAACAAACTTGCAGTTCAATATAATGGTCGATTAAAGGATTTGCTTGCCGAACTAAATGACAACCTCCCCGGAGCCACGTTCGTGGTTGCCAACGTGTACGATCTGGTGATGGAACTCATAAAAAATTACGACAAATACGGATTTAGAACAGCAAGTGTAGCATGCTGTGGAAATGGAGGGCAGTACGCAGGGATAATTCCATGTGGGCCGACGTCGAGCTTGTGCACGGACAGGTACAAGCACGTGTTCTGGGATCCATACCATCCAAGTGAAGCTGCCAACGAAATACTCGCCGAACAGCTGGTTGACGGAGACACCAGATTCATTTCTCCCATGAATCTTCGCCAGCTTCGAGACCTTTAG 1191 0.461 MLLTYHMNTCFEEEVVKQELKAMAWKKSDYKTVIMFLVLVVNVGYHGDAVKNGSLGASFIFGDSLVDAGNNNYLSTLSRANMTPNGIDFKASGGNPTGRFTNGRTIADIVGEKLGQPNYAVPFLAPNATGKAILYGVNYASGGGGILNDTGRIFVNRLGMDVQVDYFNITRKEIDKVLGKLRAREFIMKESMFSITVGSNDFLNNYLLPLVSIGARISESPDAFVDDMINHFRTQLTRLYRLDARRFVVANVGPIGCIPYQKTINRLDENECTDLANKLAVQYNGRLKDLLAELNDNLPGATFVVANVYDLVMELIKNYDKYGFRTASVACCGNGGQYAGIIPCGPTSSLCTDRYKHVFWDPYHPSEAANEILAEQLVDGDTRFISPMNLRQLRDL 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0245 396 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 57 393 - -
Lele52g0245 396 CDD SGNH_plant_lipase_like 57 381 IPR035669 -
Lele52g0245 396 Pfam GDSL-like Lipase/Acylhydrolase 59 377 IPR001087 GO:0016788
Lele52g0245 396 Gene3D SGNH hydrolase 48 380 IPR036514 -
Lele52g0245 396 SUPERFAMILY SGNH hydrolase 60 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0245 Lele-ChrLele52 1452905 1454677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0245 57 393 Acyl Lipid Metabolism Gene Families AT4G10950 34.615 1.80e-65 212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0230 49 1360214 1365108 Lele52g0245 52 1452905 1454677 hybridization
Lele50g0241 50 1434918 1436675 Lele52g0245 52 1452905 1454677 hybridization