Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0232 ATGGGACCCAGCCTCAAAAGTGAAGCCAACCTCTTCATAGCACCAACATCTGGAAGCAAAGAGGTGACATGGAGAAAAGAGGGCAATGGGAAAGTGGGACAGTGGGAATTCCATTCGGTGAGGGATGTGTTTGAGAACGGAGCATGCTTCACAGAAACCAGAGGAGGGCGGGTACCAAAGCCTTATTATAACAGGGAACAGATTTTTAAAGTAGCAGATGCGAAATATGTGAGGGCACTGACAAGATCATCAGACGGAGGATTGATATACGATGAGCAACAACTGCATCCAAGGATGGACGAGCTGCCGGGAGCATTTGGCACCAGCGCCAGCTTCGCTCTTCGATTGGGGCAGACCGTCTTCTCCTCAGCCTCCCTTCTCTTCATGTGTCTGGATGTTGAATTCTACAGCTACACTGCTTTCTGCTATTTGGTGACAGTCATGGGTTTGGTTATCCCATGGAGCGTAACATTGTTAGTGGTGGATGCTTACTGTGTCTTTATAAAATGTTTACCTCATCAACGAAGTATCATATCAATCATCGTCTTAGGAGACCTGGTATTGTCTTATCTCTCACTGGCTGCAGCATGCTCAACAGCCAGCGTCACAGATATCCTGCTTGATGTTGGTGGATCCTATTGCCCGACGAAGTTTTGTGTTAGATATCAATTGTCTGCTGCAATGGCTTTCTTGTCTTGGTTCCTCTCATCAGCTTCCTGTCTTTTTAATTTTTGGCTTCTGCCCACTCTGTAA 753 0.4661 MGPSLKSEANLFIAPTSGSKEVTWRKEGNGKVGQWEFHSVRDVFENGACFTETRGGRVPKPYYNREQIFKVADAKYVRALTRSSDGGLIYDEQQLHPRMDELPGAFGTSASFALRLGQTVFSSASLLFMCLDVEFYSYTAFCYLVTVMGLVIPWSVTLLVVDAYCVFIKCLPHQRSIISIIVLGDLVLSYLSLAAACSTASVTDILLDVGGSYCPTKFCVRYQLSAAMAFLSWFLSSASCLFNFWLLPTL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0232 250 Pfam Casparian strip membrane protein domain 107 235 IPR006702 -
Lele52g0232 250 Gene3D - 1 87 IPR012334 -
Lele52g0232 250 PANTHER CASP-LIKE PROTEIN 5B3 99 249 IPR045009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0232 Lele-ChrLele52 1382769 1387665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0232 3 81 Polysaccharide Lyase AT4G22090 42.500 5.58e-08 51.2